BAC Information

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BAC

Clone NameB6Ng01-347B19
Chromosome12 (Build37)
Map Location 59,120,812 - 59,121,944
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc25a21, AU021838, LOC100040044, Foxa1, 4921506M07Rik, EG217600, BC042761
Downstream geneSstr1, Clec14a, LOC100040183, Sec23a, Sip1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347B19.bB6Ng01-347B19.g
ACCGA128815GA128816
length1,2041,125
definitionB6Ng01-347B19.b B6Ng01-347B19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacctccttagttagagtcacgccaagatattttatattat
ttgtgactattgagaaggtgttgtttcctaatttctttctcagcctgttt
attctttgtatagagaaaggccattgacttgtttggagtttatttttata
tccagctacttcaccgagctgtttatcagggttaggagttctcctggagg
aaattttaaggtcacttatattaactattccatatctaatcttggcaaag
tgaaatttgaacttcctttccattggatccctggaacctcccgttgtgtg
tcga
gaattccctggctctgctttccaagttaccagaattaccatttgaacaca
tgcttgcaatgaaagtcagcccctagcccagctcacctttaccaatggat
ttactcattgtccaaagaacctcagcttgtaagactttccatatttgcat
ttttacaagggaggttgtttgatttaattatgaagttataggattgtgcc
tgattacactgtatatttctgagaacagagcagttaacacagtagttacc
aaagatgcagacaaggaagaatgcattcaagcatgtgggttctagtgcta
atatgaagataagcagggagagttagtgcataaccagtcaggcagcgaga
aaactctatgagatcctaagaaatcaaggaggatttctgcctggcttact
ggcagtgaagcaaggaacagagagatgaggaaaagcagaaaatattcagt
ttaacaagcatttttgtgggaactgaaggagaaaaatcctgagaagtctt
gatgtggtaacaactgcagtacaatcgagaaatatttgcctaaggaattg
ctatttacgctgacattgtatacacagattcagggccagtgagtcactca
ggaaattacatatgtaaaggtccttaggcagaaagtaatttggctttttt
taaggattaaaaaaatgacaacataaagcagtttgagttagcagtggatt
ttgaggaaattagaaaaatatatggtaatcaaatcaaagcaaggaaggag
ttaggtatcaactttatatatttttattacgtattttcctcaattacatt
tccaatgctatcccaaaagtccctccacaccctcccccccactcccctac
ccacccattcccattttttggccctggcgttcccctgtactaggacatat
aaagtttgcaagtccaatgggcctctctttccagtgatggcctactaggc
catcttttgatacatatgcagctagagtcaagagctccggggtactgggt
agtcatatgtgcacctacagatgcagatctctttagcttcctggatactt
tctctagctcctccatggggccctgtgatcaatccaatagatgactgtga
gcatcactttgtgttttgctaggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_59120812_59121944
seq2: B6Ng01-347B19.g_67_1191

seq1  GAATTCCCTGGCTCTGCTTTCCAAGTTACCAGAATTACCATTTGAACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGGCTCTGCTTTCCAAGTTACCAGAATTACCATTTGAACACA  50

seq1  TGCTTGCAATGAAAGTCAGCCCCTAGCCCAGCTCACCTTTACCAATGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGCAATGAAAGTCAGCCCCTAGCCCAGCTCACCTTTACCAATGGAT  100

seq1  TTACTCATTGTCCAAAGAACCTCAGCTTGTAAGACTTTCCATATTTGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCATTGTCCAAAGAACCTCAGCTTGTAAGACTTTCCATATTTGCAT  150

seq1  TTTTACAAGGGAGGTTGTTTGATTTAATTATGAAGTTATAGGATTGTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACAAGGGAGGTTGTTTGATTTAATTATGAAGTTATAGGATTGTGCC  200

seq1  TGATTACACTGTATATTTCTGAGAACAGAGCAGTTAACACAGTAGTTACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTACACTGTATATTTCTGAGAACAGAGCAGTTAACACAGTAGTTACC  250

seq1  AAAGATGCAGACAAGGAAGAATGCATTCAAGCATGTGGGTTCTAGTGCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGCAGACAAGGAAGAATGCATTCAAGCATGTGGGTTCTAGTGCTA  300

seq1  ATATGAAGATAAGCAGGGAGAGTTAGTGCATAACCAGTCAGGCAGCGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAAGATAAGCAGGGAGAGTTAGTGCATAACCAGTCAGGCAGCGAGA  350

seq1  AAACTCTATGAGATCCTAAGAAATCAAGGAGGATTTCTGCCTGGCTTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTATGAGATCCTAAGAAATCAAGGAGGATTTCTGCCTGGCTTACT  400

seq1  GGCAGTGAAGCAAGGAACAGAGAGATGAGGAAAAGCAGAAAATATTCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTGAAGCAAGGAACAGAGAGATGAGGAAAAGCAGAAAATATTCAGT  450

seq1  TTAACAAGCATTTTTGTGGGAACTGAAGGAGAAAAATCCTGAGAAGTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAAGCATTTTTGTGGGAACTGAAGGAGAAAAATCCTGAGAAGTCTT  500

seq1  GATGTGGTAACAACTGCAGTACAATCGAGAAATATTTGCCTAAGGAATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGGTAACAACTGCAGTACAATCGAGAAATATTTGCCTAAGGAATTG  550

seq1  CTATTTACGCTGACATTGTATACACAGATTCAGGGCCAGTGAGTCACTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTACGCTGACATTGTATACACAGATTCAGGGCCAGTGAGTCACTCA  600

seq1  GGAAATTACATATGTAAAGGTCCTTAGGCAGAAAGTAATTTGGCTTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTACATATGTAAAGGTCCTTAGGCAGAAAGTAATTTGGCTTTTTT  650

seq1  TAAGGATTAAAAAAATGACAACATAAAGCAGTTTGAGTTAGCAGTGGATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGATTAAAAAAATGACAACATAAAGCAGTTTGAGTTAGCAGTGGATT  700

seq1  TTGAGGAAATTAGAAAAATATATGGTAATCAAATCAAAGCAAGGAAGGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGAAATTAGAAAAATATATGGTAATCAAATCAAAGCAAGGAAGGAG  750

seq1  TTAGGTATCAACTTTATATATTTTTATTACGTATTTTCCTCAATTACATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTATCAACTTTATATATTTTTATTACGTATTTTCCTCAATTACATT  800

seq1  TCCAATGCTATCCCAAAAGTCCCTCCACACCCTCCCCCCCACTCCCCTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATGCTATCCCAAAAGTCCCTCCACACCCTCCCCCCCACTCCCCTAC  850

seq1  CCACCCATTCCCATTTTTTGGCCCTGGCGTTCCCCTGTACTAGGACATAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCATTCCCATTTTTTGGCCCTGGCGTTCCCCTGTACTAGGACATAT  900

seq1  AAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCCTACTAGGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCCTACTAGGC  950

seq1  CATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTT  1000
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGGT  1000

seq1  AGTTCATAATGTTGCACCTACAGGGTTGCAGATCTCTTTAGCTCCTTGGA  1050
      || |||| ||| ||||||||||  | ||||||||||||||||| | ||||
seq2  AG-TCAT-ATG-TGCACCTACA--GATGCAGATCTCTTTAGCTTCCTGGA  1045

seq1  TACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATCCAATAGTTG  1100
      |||||||||||||||||||||  |||||||||||||| ||||||||| ||
seq2  TACTTTCTCTAGCTCCTCCAT--GGGGCCCTGTGATCAATCCAATAGATG  1093

seq1  ACTGTGAGCATCCACTTTTGTG-TTTGCTAGGCC  1133
      ||||||||||| ||| |||||| |||||||||||
seq2  ACTGTGAGCAT-CAC-TTTGTGTTTTGCTAGGCC  1125