BAC Information

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BAC

Clone NameB6Ng01-347G18
Chromosome12 (Build37)
Map Location 91,223,806 - 91,224,952
singlet/doubletsinglet
Overlap geneNrxn3
Upstream genenone
Downstream geneLOC100039498, LOC100039287, Dio2, LOC100039295, 4930544I03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347G18.bB6Ng01-347G18.g
ACCGA129025GA129026
length1,151693
definitionB6Ng01-347G18.b B6Ng01-347G18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatgatcaatcttgacttagcaagaactcataagactgaaagga
tacaggtgcagctcaccagatgcctgtgcaactgtgcatctataaagctc
tgagttctgaacactgtatactctgtaaaagttgagtttgcccaggttag
cacccctattcacagatctgtgacgaatggacacatcaaaattgctggag
ctttctggatgatgacaacctgcctagctccaggtcagtgagagactctg
tctcatgggattaatgcaaagagtgaaagcaagacacaggcatccttatc
tggcttctgccctgagcatgcatgcactcttgtgaaaattatactatatg
gacatacttcacatacatagccacacacagccacacacagccacacacag
ccacacacacacacacacacacacacacacttaattatagatctcttgcc
cagcttttggattagattgagctttcagtcaggaatggaattacgattga
ctttcatgagttttccacaattaactattcaatttggagaaaactattca
atttgaaaaaaaatttgccttatttttttctaaacaattgtcacatttaa
attttgcctctgatatctcaacctatgtagtatataattcccaggctgtt
actgacttaaagccagtaacatgaaggtaaagtttcttttaaagtatttc
tctatgtctgcttcggctgtctttgtaaaaacaaaacccaaaacattatc
tcatcaaaagccacttatgtaaattaacataatctacatttgtgatttgg
agtaagcctttagcataaaatgtagaatctagatgacctatatcctttgg
gatttcggtcaccaatagtcaaacaagtttgactagtggaggcttttctt
gaaatctaaaaatgccataatgctgggtttaactccagatgccatcaagt
gaatgctgggagctggtgtgccttaatggcaaggctgacttaacactgct
ggacacgcaggagatgaattatctcattgtccacaagcttacacttgcta
gtcattactctggggtattgtcaggtgccaactgggaaaagcaataactt
caattgcactcttgaaagctacgaatgatgggattttagatcgctgctgc
a

gaattcaaaagtggtggatggaaaaaatgatgaactaattcttaaaaggc
agttgagttcaatctgtaactgactgtgaacaatcaattgagataactca
ctaccttcagacccaagatacacagaccacatgaggctcaagaataaaga
agaccaacatgtggatgcttcagtccttcttagaaggggaaacaaaatat
tcaagggaggaaagtgtggagcaaagactgtaggaaaggtcatttagaga
ctgtcccacctggtgatccatcccatatacagacaccaaacccagacact
attgcatatgccaagaagtgcttgtgacaggacctgatatagctgtctcc
tgagaggctttgccaaagcctgacaaatacaaagatggatgcttgcagtt
gaccactggactgagcaaggggaccctaatggaggagttagagaaaggac
caaaggaactgaaggggtttgtaatccccgaagaagaagaacaacaatat
caaccaaccagaccccagagcttccagggactaaaccacctaccaaagag
tacatatggctccagctgcatatgtagcagaggatggtcttgtctggcat
caacgggaggagaggccttttggccctgtgaaggttcagtgccccaatgt
agggaaatttcagggcagtgaggtaggagtgggtgggtgggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_91223806_91224952
seq2: B6Ng01-347G18.b_45_1195

seq1  GAATTCTATGATCAATCTTGACTTAGCAAGAACTCATAAGACTGAAAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGATCAATCTTGACTTAGCAAGAACTCATAAGACTGAAAGGA  50

seq1  TACAGGTGCAGCTCACCAGATGCCTGTGCAACTGTGCATCTATAAAGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGTGCAGCTCACCAGATGCCTGTGCAACTGTGCATCTATAAAGCTC  100

seq1  TGAGTTCTGAACACTGTATACTCTGTAAAAGTTGAGTTTGCCCAGGTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCTGAACACTGTATACTCTGTAAAAGTTGAGTTTGCCCAGGTTAG  150

seq1  CACCCCTATTCACAGATCTGTGACGAATGGACACATCAAAATTGCTGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCTATTCACAGATCTGTGACGAATGGACACATCAAAATTGCTGGAG  200

seq1  CTTTCTGGATGATGACAACCTGCCTAGCTCCAGGTCAGTGAGAGACTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGGATGATGACAACCTGCCTAGCTCCAGGTCAGTGAGAGACTCTG  250

seq1  TCTCATGGGATTAATGCAAAGAGTGAAAGCAAGACACAGGCATCCTTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGGGATTAATGCAAAGAGTGAAAGCAAGACACAGGCATCCTTATC  300

seq1  TGGCTTCTGCCCTGAGCATGCATGCACTCTTGTGAAAATTATACTATATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCTGCCCTGAGCATGCATGCACTCTTGTGAAAATTATACTATATG  350

seq1  GACATACTTCACATACATAGCCACACACAGCCACACACAGCCACACACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATACTTCACATACATAGCCACACACAGCCACACACAGCCACACACAG  400

seq1  CCACACACACACACACACACACACACACACTTAATTATAGATCTCTTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACACACACACACACACACACACACACTTAATTATAGATCTCTTGCC  450

seq1  CAGCTTTTGGATTAGATTGAGCTTTCAGTCAGGAATGGAATTACGATTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTTGGATTAGATTGAGCTTTCAGTCAGGAATGGAATTACGATTGA  500

seq1  CTTTCATGAGTTTTCCACAATTAACTATTCAATTTGGAGAAAACTATTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATGAGTTTTCCACAATTAACTATTCAATTTGGAGAAAACTATTCA  550

seq1  ATTTGAAAAAAAATTTGCCTTATTTTTTTCTAAACAATTGTCACATTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAAAAAAAATTTGCCTTATTTTTTTCTAAACAATTGTCACATTTAA  600

seq1  ATTTTGCCTCTGATATCTCAACCTATGTAGTATATAATTCCCAGGCTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCCTCTGATATCTCAACCTATGTAGTATATAATTCCCAGGCTGTT  650

seq1  ACTGACTTAAAGCCAGTAACATGAAGGTAAAGTTTCTTTTAAAGTATTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACTTAAAGCCAGTAACATGAAGGTAAAGTTTCTTTTAAAGTATTTC  700

seq1  TCTATGTCTGCTTCGGCTGTCTTTGTAAAAACAAAACCCAAAACATTATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGTCTGCTTCGGCTGTCTTTGTAAAAACAAAACCCAAAACATTATC  750

seq1  TCATCAAAAGCCACTTATGTAAATTAACATAATCTACATTTGTGATTTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAAAAGCCACTTATGTAAATTAACATAATCTACATTTGTGATTTGG  800

seq1  AGTAAGCCTTTAGCATAAAATGTAGAATCTAGATGACCTATATCCTTTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGCCTTTAGCATAAAATGTAGAATCTAGATGACCTATATCCTTTGG  850

seq1  GATTTCGGTCACCAATAGTCAAACAAGTTTGACTAGTGGAGGC-TTTCTT  899
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GATTTCGGTCACCAATAGTCAAACAAGTTTGACTAGTGGAGGCTTTTCTT  900

seq1  GAAATCTAAAAATGCCATAATGCTGGG-TTAACTCCAGATGCCATCAAGT  948
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GAAATCTAAAAATGCCATAATGCTGGGTTTAACTCCAGATGCCATCAAGT  950

seq1  GAATGCT-GGAGCTGGTGTGCCTTAATGGCAAGGCTGACTTAACACTGCT  997
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCTGGGAGCTGGTGTGCCTTAATGGCAAGGCTGACTTAACACTGCT  1000

seq1  GGACACGCCAGGGAGATGAATTATCTCATTGTCCCACAGCTTACACTTGC  1047
      ||||||||   |||||||||||||||||||||||   |||||||||||||
seq2  GGACACGC--AGGAGATGAATTATCTCATTGTCCACAAGCTTACACTTGC  1048

seq1  TAGTCATTACTCCTGGGGTATTGTTCAGTGCAAACTGGG-AAAGCAATAA  1096
      ||||||||||| ||||||||||||   |||| ||||||| ||||||||||
seq2  TAGTCATTACT-CTGGGGTATTGTCAGGTGCCAACTGGGAAAAGCAATAA  1097

seq1  C-TCATTGCCACCCT--GAAGCTACAGATGAT-GGATTTTAGATCGCTGG  1142
      | ||| |  ||| ||   |||||||  ||||| ||||||||||||||| |
seq2  CTTCAATTGCACTCTTGAAAGCTACGAATGATGGGATTTTAGATCGCT-G  1146

seq1  CTGCA  1147
      |||||
seq2  CTGCA  1151


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