BAC Information

Click to search

BAC

Clone NameB6Ng01-347H13
Chromosome12 (Build37)
Map Location 39,741,035 - 39,742,060
singlet/doubletsinglet
Overlap genenone
Upstream geneDgkb, LOC668824, LOC100043142, Etv1, LOC100043145
Downstream geneLOC100043148
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347H13.bB6Ng01-347H13.g
ACCGA129063GA129064
length9881,019
definitionB6Ng01-347H13.b B6Ng01-347H13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctagaacatctaaggttttatttttccttttttttctacattgac
ataatagatattaataatagagttgttcaggttccatgagtttgtaggct
ttctgttgtttctgttgttgaaatctagctttaatatctggtggtctgat
agaatgcagggcattatttcaactttttgttgtaacttttgagacgtgcc
ttgtgacattgtatgtgttaaatattttgaaaaaagttctatgaggttct
gagaagaaagtatatactttttttggtttggctaaaacgctctttaaata
ttttagatccatttggtttacaaattctgctagttacaatattattcctc
tggtataattaggtctacatgatgtgtctgtcagtcagagtggatcattg
aagactcccactatcagtgtgtaagagtcaaaatgtaatttaagctttag
taatgtttctttacaaatgtgggtgcccttgcatttggatcatagatact
aagaactcagacatcaccttggtggattttacctttgatgaatgggaact
gtcattttcccatctttttttattttattggttgtaagtctattttgtta
gatattaaaatatctatactagcttgtttcttaggtccattttcttgaaa
taatttttccaaccctttattcagaggcaatatctatctttgatgctgag
gtgtttttcctgtatgcagcaaagtgaaggacactgtttttgcaaccatt
ctgttagtctgtgtcttttattgagggaattggaatcaatgatattgaaa
gatataaatgaccaatgattgttaattcctattattctgtaattggtggt
ggtggtggaggtggtgggggtgcaggtgttaaatgcagggcaggtgtggg
tgcaggtgtggagtacaggttgggatgcaagtgtgggatgaaggtgctgt
tgtggtgcagtgtagtagttggatccaaatggaatcaa
gaattcttttaaaattccaaatttttgcctatcatttttgtggggttgaa
aactcatagttatttttactatcatatactgtgaaaatcacaggtttcat
cgtggaatcttcatatatttaaaacttgtatattgttcctattaccattt
cttgtcctttcttcttcatcctaggcccagtcttcagaaatagtctcctt
catgactttcatgtttgatctactgttggaattcacattttaatttagta
taagcttactgtacaaaatatgatttattatgacatttttacatatgtac
ataataaacttttattatattcaccctctatcactaaatctatttgccac
cagcccatctctttcctctttccaaatagttcagcaattgtcatgtcttt
tttttttaaacttaatttcttcatatgagactaaaatgaggtgtttgtgt
tttgggacctgactttttttacttatcacgttaagcaaaggtgctataat
ctttcacttttatcagaaatgtgtcttcaactgtcaataagacaaaaagg
ccaccaacagattgggtaaggacctttactaatcctaagtcagataggcg
actaatatccaatatatataaagaactcaagaagatggactccagaaaat
caaataaccccattaaaaaatagggcacagagctaaagaaagaattctca
actgaggaatatcgaacagctgagaaagcactcaaaaaaatgttcaacat
ccttaatcattagggaaatgaacaaccatgagattccacctcataccagt
cagaatagctaagatcaaaaactcaggtgacagcagatgttggcaaggat
gtggagaaagaggaacactcctccattgtggtgggattgcaagcttgtac
aaccactctggaagtcactctggtggttcctcagaaactggagtgatact
accaggagaagccagcatactctcctgagcattatctagagatgtccaac
tgatagaaggacacatgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_39741035_39742060
seq2: B6Ng01-347H13.g_67_1085

seq1  GAATTCTTTTAAAATTCCAAATTTTTGCATATCATTTTTGTGGGGTTGAA  50
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GAATTCTTTTAAAATTCCAAATTTTTGCCTATCATTTTTGTGGGGTTGAA  50

seq1  AACTCATAGTTATTTTTACTATCATATACTGTGAAAATCACAGGTTTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATAGTTATTTTTACTATCATATACTGTGAAAATCACAGGTTTCAT  100

seq1  CATGGAATCTTCATATATTTAAAACTTGTATATTGTTCCTATTACCATTT  150
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGAATCTTCATATATTTAAAACTTGTATATTGTTCCTATTACCATTT  150

seq1  CTTGTCCTTTCTTCTTCATCCTAGGCCCAGTCTTCAGAAATAGTCTCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCCTTTCTTCTTCATCCTAGGCCCAGTCTTCAGAAATAGTCTCCTT  200

seq1  CATGACTTTCATGTTTGATCTACTGTTGGAATTCACATTTTAATTTAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACTTTCATGTTTGATCTACTGTTGGAATTCACATTTTAATTTAGTA  250

seq1  TAAGCTTACTGTACAAAATATGATTTATTATGACATTTTTACATATGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTTACTGTACAAAATATGATTTATTATGACATTTTTACATATGTAC  300

seq1  ATAATAAACTTTTATTATATTCACCCTCTATCACTAAATCTATTTGCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAACTTTTATTATATTCACCCTCTATCACTAAATCTATTTGCCAC  350

seq1  CAGCCCATCTCTTTCCTCTTTCCAAATAGTTCAGCAATTGTCATGTCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCATCTCTTTCCTCTTTCCAAATAGTTCAGCAATTGTCATGTCTTT  400

seq1  TTTTTTTAAACTTAATTTCTTCATATGAGACTAAAATGAGGTGTTTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAAACTTAATTTCTTCATATGAGACTAAAATGAGGTGTTTGTGT  450

seq1  TTTGGGACCTGACTTTTTTTACTTATCACATTAAGCAAAGTTGCTATAAT  500
      ||||||||||||||||||||||||||||| |||||||||| |||||||||
seq2  TTTGGGACCTGACTTTTTTTACTTATCACGTTAAGCAAAGGTGCTATAAT  500

seq1  CTTTCACTTTTATCAGAAATGTGTCTTCAACTGTCAATAAGACAAAAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCACTTTTATCAGAAATGTGTCTTCAACTGTCAATAAGACAAAAAGG  550

seq1  CCACCAACAGATTGGGTAAGGACCTTTACTAATCCTAAGTCAGATAGGGG  600
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CCACCAACAGATTGGGTAAGGACCTTTACTAATCCTAAGTCAGATAGGCG  600

seq1  ACTAATATCCAATATATATAAAGAACTCAAGAAGATGGACTCCAGAAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATATCCAATATATATAAAGAACTCAAGAAGATGGACTCCAGAAAAT  650

seq1  CAAATAACCCCATTAAAAAATAGGGCACAGAGCTAAAGAAAGAATTCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAACCCCATTAAAAAATAGGGCACAGAGCTAAAGAAAGAATTCTCA  700

seq1  ACTGAGGAATATCGAACAGCTGAG-AAGCACTCAAAAAAATGTTCAACAT  749
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ACTGAGGAATATCGAACAGCTGAGAAAGCACTCAAAAAAATGTTCAACAT  750

seq1  CCTTAATCATTAGGGAAATGAACAACCATGAGATTCCACCTCATACCAGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAATCATTAGGGAAATGAACAACCATGAGATTCCACCTCATACCAGT  800

seq1  CAGAATAGCTAAGATCAAAAATTCAGGTGACAGCAGATGTTGGCAAGGAT  849
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CAGAATAGCTAAGATCAAAAACTCAGGTGACAGCAGATGTTGGCAAGGAT  850

seq1  GTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTA  899
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GTGGAGAAAGAGGAACACTCCTCCATTG-TGGTGGGATTGCAAGCTTGTA  899

seq1  CAACCACTCTGGAAGTCACTCTGGTGGTTCCTCAGAAAACTGGATATAAT  949
      ||||||||||||||||||||||||||||||||||| ||||||||  | ||
seq2  CAACCACTCTGGAAGTCACTCTGGTGGTTCCTCAG-AAACTGGA-GTGAT  947

seq1  ACTACC-GGAGAAGCCAGCAATAACTCTCCTGGGCATATATCTAGAAGAT  998
      |||||| |||||||||||||   ||||||||| |||| ||||||| ||||
seq2  ACTACCAGGAGAAGCCAGCA--TACTCTCCTGAGCAT-TATCTAG-AGAT  993

seq1  GTTCCAACTGGTAAGAAGGACACATGCT  1026
      | |||||||| | |||||||||||||||
seq2  G-TCCAACTGAT-AGAAGGACACATGCT  1019