BAC Information

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BAC

Clone NameB6Ng01-349D09
Chromosome12 (Build37)
Map Location 79,294,534 - 79,295,120
singlet/doubletsinglet
Overlap genenone
Upstream geneFut8, LOC230765, LOC666659
Downstream geneEG626215, Gphn, 4921509E07Rik, Mpp5, Atp6v1d, LOC100041878, Eif2s1, Plek2, 6330442E10Rik, Plekhh1, Pigh, LOC666722, Arg2, Vti1b, Rdh11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349D09.bB6Ng01-349D09.g
ACCGA130269GA130270
length5881,217
definitionB6Ng01-349D09.b B6Ng01-349D09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaaggagtatattcaccttataatgatgtgtgtggatattatag
tgaaaagcatttaacaaaaacaattctttgaaacagaagccaagtccagt
tgaggggggggggtagttgatgttctatatcagcatgtagtacaggaaga
agggagggtaaagttttagataatcattgaaagtggaggaactcaaagta
gaaaataggtcacttggtgattgacagtgttggtgggaagaagaatgatg
tcatgagttttagaattgcacctgagcagtaagaaaagaaagtcaaccag
ccagagtcaaaaacatcactatgtggtgttaaaggtcaaggtggatttag
aagttggagatctgtcatggtataaattagcaggtattctgttttgccca
tcagtagctggcaaactgaaaatacagttgagaaatacaggtgattggtg
gattctgggctggaacttggtagaaccaataagcagaaattcaaggaaga
aggttttgagaatgttggtgagttattcatcaaaagatctgcctaggtct
tcaggatattcaagataaaaaatgagaaggggttgtga
gaattctgatggaaattgtgttgaatctgtagattgttttgggtagaatg
accatttagactatgttaatactactgatccatgagcataggagatatct
ccaacttctgatattttcttcagtttctcccttcaatatcttaacatttt
ttaatgtacaagtctttcacttgcttgggttagtgtcaccccaagatatt
attttgagaatactgtaaaaggtattgtatccctggtttcttctttagtc
tgtttgtcctctgtatttaggaaggctactgatttttgtgtgttaattct
gtatcctgctactttgctcaaagtgtttatcagctacagaagtttcctca
tgtagttttagggtcatttacaagcaaaatcatatcaaatgcaaataatg
atattttgatttctttcttctttatttgtactcccttgatctctttcagt
tgacttgctgctctagctaagtaagtactatattaaatagatatagaaaa
atatagaaaaagtggaaatccttgtcttatttctattttagtggaaatgc
tctgagtttctctccattgatgttggatatgaacttgctgaaaattacct
ctattatgttgagatgtgtgccttgtatccctagtctctccaggacttta
atcatgaaagtatgttgaattttgtctaaggcctgtactgcacttactga
catgatcatgtgatgtttgtctttcagcctgtttatgcagtagattacac
ttattcatatacatattttgagccaaccctacatctctgtgatgaagccc
acttgatcatgatggataatcttttttgatattctttggattcagtgtgc
tggtgttttatttagaatttttgcatctaaatttaaaatagaatactggt
ctataatttccttgctttgtagggtctttgtgtggaataagtatcaggta
attatagacttgtaaaaataattaggaaatgttcttcagtttctaccttg
tggaatacttggggatatgacattgagaatcgggtagattctacactgat
tcatgggccctgcttttgggggaagaggggagaaatttagctatgcctct
attccactgtgggtcatggtctggctatgcttgcctgaccttgattactg
tagctgtcataggactctatcattggacctaggttccaataaatactggt
gcatagaggacacacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_79294534_79295120
seq2: B6Ng01-349D09.b_50_637 (reverse)

seq1  TCACAACCCCTTCTCATTTTTTATCTTGAATATCCTGAAGACCTAGGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAACCCCTTCTCATTTTTTATCTTGAATATCCTGAAGACCTAGGCAG  50

seq1  ATCTTTTGATGAAT-ACTCACCAACATTCTCAAAACCTTCTTCCTTGAAT  99
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATCTTTTGATGAATAACTCACCAACATTCTCAAAACCTTCTTCCTTGAAT  100

seq1  TTCTGCTTATTGGTTCTACCAAGTTCCAGCCCAGAATCCACCAATCACCT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTTATTGGTTCTACCAAGTTCCAGCCCAGAATCCACCAATCACCT  150

seq1  GTATTTCTCAACTGTATTTTCAGTTTGCCAGCTACTGATGGGCAAAACAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTCTCAACTGTATTTTCAGTTTGCCAGCTACTGATGGGCAAAACAG  200

seq1  AATACCTGCTAATTTATACCATGACAGATCTCCAACTTCTAAATCCACCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCTGCTAATTTATACCATGACAGATCTCCAACTTCTAAATCCACCT  250

seq1  TGACCTTTAACACCACATAGTGATGTTTTTGACTCTGGCTGGTTGACTTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTTAACACCACATAGTGATGTTTTTGACTCTGGCTGGTTGACTTT  300

seq1  CTTTTCTTACTGCTCAGGTGCAATTCTAAAACTCATGACATCATTCTTCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTTACTGCTCAGGTGCAATTCTAAAACTCATGACATCATTCTTCT  350

seq1  TCCCACCAACACTGTCAATCACCAAGTGACCTATTTTCTACTTTGAGTTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACCAACACTGTCAATCACCAAGTGACCTATTTTCTACTTTGAGTTC  400

seq1  CTCCACTTTCAATGATTATCTAAAACTTTACCCTCCCTTCTTCCTGTACT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACTTTCAATGATTATCTAAAACTTTACCCTCCCTTCTTCCTGTACT  450

seq1  ACATGCTGATATAGAACATCAACTACCCCCCCCCCTCAACTGGACTTGGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCTGATATAGAACATCAACTACCCCCCCCCCTCAACTGGACTTGGC  500

seq1  TTCTGTTTCAAAGAATTGTTTTTGTTAAATGCTTTTCACTATAATATCCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTCAAAGAATTGTTTTTGTTAAATGCTTTTCACTATAATATCCA  550

seq1  CACACATCATTATAAGGTGAATATACTCCTTGGAATTC  587
      ||||||||||||||||||||||||||||||||||||||
seq2  CACACATCATTATAAGGTGAATATACTCCTTGGAATTC  588