BAC Information

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BAC

Clone NameB6Ng01-350M14
Chromosome12 (Build37)
Map Location 66,501,826 - 66,504,581
singlet/doubletdoublet
Overlap genenone
Upstream geneEG623046, LOC623123, LOC217645, LOC217647, Gm527, Klhl28, A430041B07Rik, Prpf39, Fkbp3, Fancm, C79407, Wdr20b
Downstream geneLOC100040700, EG238217
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-350M14.bB6Ng01-350M14.g
ACCGA131360GA131361
length1,179854
definitionB6Ng01-350M14.b B6Ng01-350M14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,501,826 - 66,502,698)(66,503,734 - 66,504,581)
sequence
gaattgacacaactccacatgcacaacaaaatatacataaatctccttga
gtaacaaaataagccaattcagatcagatgtgtgcagtgggaagtattaa
aaagaaacggaagcgatgcattcccggctcttgtgcctctgccccagcag
cctggctggctttgcactggtgggcaatggccgacctgttttatcccatg
gagacgcttactcagaactccacaatctcttcacccagctcactaggttc
ccactgttgggttgttaccacaccaaccccatgcttcaaatcccccacgg
cctttgtggtgcacctctggcaaacccatgctttgctgctgtacctttct
ctccactttgtgaaggaaaacacaacacaaatttagttcagaaacaatgg
taactcaatctctgggcacaacaactaaaatctaatcttgtaagccttat
taaaatccaattcctcttgggggtaaatccttgcggatccaccatggtac
tgggaaattctagcagctacatcttacccctctgctgtcccattccaaag
aggacctaactctctcctgcttcctctcttcctctgtccaacacggaatt
cgcccagtgattggttcctttattcattaggggattggttcacaagaagc
cacctgagtatgtgactcattccttattccagacagcctctactgggaga
gcaagcagcacagagccatccacaacagatgtgactacattgaaactctt
tgtaaagtccataaagaaacattctataggtagactaagaaaagcaagga
ttgataagagaatttggagagcttcaaaaagataaaactttataattttt
ctctgcagatctcagataggatttccagaccaaggcacagaattgcattc
atccacttgtaaaacaaaactgatggtaaacatgaatttgatttaaaaga
attgaaaaataaatgcaatgtggtattactgggtacttctgtatggcaat
acatcaatttcctgttatcaataaggtggggttttattagtgcctttgta
gtttgcagtttagcaattagtgactatttattacagataggaaacacatt
tagcatgagtcatgagaatgagcagaatagtacctctgtactactgatct
agaccgatccctatgtagctaggttggcc
gaattcaattcccagtgagcagaggacctgaattcaattcccagcaacca
catgatggctcacaaccatctgtacagctacagtataatcatatacatat
gaatgaatgaatgaatgaatgaatgaatgaatgaatgaatgaatgaatga
caggctaatcggtgaagcctgttcaaataaataaataaataaataaataa
ataaataaataaataaatggagtgtggatgaaagggtacactgtgggaca
ctctgtgacacgctacagcttccacaagatttttccccctctgttgtggg
ggaggtggtaaggatagaggacaactatgaggggtggtgagtagaattag
ggtgcatgatatgaaattcacaaaaaaacaataaaaagtttttttaaatt
aaattaaaaataaaaaacagatgcttgcacatatatgacctaatttaatc
ctcctagcaaccctttgtggaaaggactctcactcttcccatttcacaga
tggggaaacaaaggcaggaagaggatcgataccatccggagagcacagag
gtagagggtggaaagcagtgagcttttagagttcctcacagagagtctgg
aatacagtaatcctggataaatcagtcaatttttagcgtgtcatgatttt
ccaccttctgctaccctcatttggttcacttactaggaattctattttct
acctctttccctgtctcttcagctgggagatggcttttccttacaacctg
cccagtttttccttttggcacctccccttcttctaataacatcgtactgg
tatatttccatactaatttttctctcacacacagacacattttttcttga
gaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_66501826_66502698
seq2: B6Ng01-350M14.b_369_1228

seq1  GCAAACCCATGCTTTGCTGCTGTACCTTTCTCTCCACTTTGTGAAGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACCCATGCTTTGCTGCTGTACCTTTCTCTCCACTTTGTGAAGGAAA  50

seq1  ACACAACACAAATTTAGTTCAGAAACAATGGTAACTCAATCTCTGGGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAACACAAATTTAGTTCAGAAACAATGGTAACTCAATCTCTGGGCAC  100

seq1  AACAACTAAAATCTAATCTTGTAAGCCTTATTAAAATCCAATTCCTCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTAAAATCTAATCTTGTAAGCCTTATTAAAATCCAATTCCTCTTG  150

seq1  GGGGTAAATCCTTGCGGATCCACCATGGTACTGGGAAATTCTAGCAGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTAAATCCTTGCGGATCCACCATGGTACTGGGAAATTCTAGCAGCTA  200

seq1  CATCTTACCCCTCTGCTGTCCCATTCCAAAGAGGACCTAACTCTCTCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTACCCCTCTGCTGTCCCATTCCAAAGAGGACCTAACTCTCTCCTG  250

seq1  CTTCCTCTCTTCCTCTGTCCAACACGGAATTCGCCCAGTGATTGGTTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCTCTTCCTCTGTCCAACACGGAATTCGCCCAGTGATTGGTTCCT  300

seq1  TTATTCATTAGGGGATTGGTTCACAAGAAGCCACCTGAGTATGTGACTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCATTAGGGGATTGGTTCACAAGAAGCCACCTGAGTATGTGACTCA  350

seq1  TTCCTTATTCCAGACAGCCTCTACTGGGAGAGCAAGCAGCACAGAGCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTATTCCAGACAGCCTCTACTGGGAGAGCAAGCAGCACAGAGCCAT  400

seq1  CCACAACAGATGTGACTACATTGAAACTCTTTGTAAAGTCCATAAAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAACAGATGTGACTACATTGAAACTCTTTGTAAAGTCCATAAAGAAA  450

seq1  CATTCTATAGGTAGACTAAGAAAAGCAAGGATTGATAAGAGAATTTGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTATAGGTAGACTAAGAAAAGCAAGGATTGATAAGAGAATTTGGAG  500

seq1  AGCTTCAAAAAGATAAAACTTTATAATTTTTCTCTGCAGATCTCAGATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCAAAAAGATAAAACTTTATAATTTTTCTCTGCAGATCTCAGATAG  550

seq1  GATTTCCAGACCAAGGCACAGAATTGCATTCATCCACTTGTAAAACAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCCAGACCAAGGCACAGAATTGCATTCATCCACTTGTAAAACAAAA  600

seq1  CTGATGGTAAACATGAATTTGATTTAAAAGAATTGAAAAATAAATGCAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGGTAAACATGAATTTGATTTAAAAGAATTGAAAAATAAATGCAAT  650

seq1  GTGGTATTACTGGGTTACTTCTGTATGGCAATACATC-ATTTCCTGTTAT  699
      |||||||||||||| |||||||||||||||||||||| ||||||||||||
seq2  GTGGTATTACTGGG-TACTTCTGTATGGCAATACATCAATTTCCTGTTAT  699

seq1  CA--TAGGTGGGGTTTTATTAGTGCCTTTGTAG-TTGCAG-TTAGCAATT  745
      ||   |||||||||||||||||||||||||||| |||||| |||||||||
seq2  CAATAAGGTGGGGTTTTATTAGTGCCTTTGTAGTTTGCAGTTTAGCAATT  749

seq1  AGTGACTATTTAATTTTAACAGATAGGAAACACAATTTAAGCAAATGAAG  795
      ||||||||||||    | ||||||||||||||||  || |||  ||| ||
seq2  AGTGACTATTTA----TTACAGATAGGAAACACA--TTTAGC--ATG-AG  790

seq1  TCATGGAGATGAGCAGAATAAGTA-CTCTGTACTACTGATTTCTTTTAGA  844
      |||||   ||||||||||| |||| ||||||||||||||     | ||||
seq2  TCATGAGAATGAGCAGAAT-AGTACCTCTGTACTACTGA-----TCTAGA  834

seq1  CAGGTATCCCTATGTAGCCTTAGTTGGCC  873
      | |  |||||||||||| ||  |||||||
seq2  CCG--ATCCCTATGTAG-CTAGGTTGGCC  860

seq1: chr12_66503734_66504581
seq2: B6Ng01-350M14.g_69_922 (reverse)

seq1  TCTCTC---AGAAAACGTGTCTGTGTGTGAGAG-AAAATTAGTCTGGTAA  46
      ||||||   | |||| ||||||||||||||||| ||||||||| ||| ||
seq2  TCTCTCAAGAAAAAATGTGTCTGTGTGTGAGAGAAAAATTAGTATGG-AA  49

seq1  ATATACCAGTAAGATGTTATTAGAAGAAGGGAGGTTGCCAAAAGGAAAAA  96
      ||||||||||| |||||||||||||||||||  | |||||||||||||||
seq2  ATATACCAGTACGATGTTATTAGAAGAAGGGGAGGTGCCAAAAGGAAAAA  99

seq1  CTGGGCAGGTTGCTAAGG-AAAGCCATCT-CCAGCTGAAGAGACAGGGAA  144
      |||||||||||| ||||| |||||||||| ||||||||||||||||||||
seq2  CTGGGCAGGTTG-TAAGGAAAAGCCATCTCCCAGCTGAAGAGACAGGGAA  148

seq1  AGAGGTAG-AAATAGAATTCCTAGTAAGTGAACCAAATGAGGGTAGCAGA  193
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTAGAAAATAGAATTCCTAGTAAGTGAACCAAATGAGGGTAGCAGA  198

seq1  AGGTGGAAAATCATGACACGCT-AAAATTGACTGATTTATCCAGGATTAC  242
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AGGTGGAAAATCATGACACGCTAAAAATTGACTGATTTATCCAGGATTAC  248

seq1  TGTATTCCAGACTCTCTGTGAGGAACTCTAAAAGCTCACTGCTTTCCACC  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTCCAGACTCTCTGTGAGGAACTCTAAAAGCTCACTGCTTTCCACC  298

seq1  CTCTACCTCTGTGCTCTCCGGATGGTATCGATCCTCTTCCTGCCTTTGTT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACCTCTGTGCTCTCCGGATGGTATCGATCCTCTTCCTGCCTTTGTT  348

seq1  TCCCCATCTGTGAAATGGGAAGAGTGAGAGTCCTTTCCACAAAGGGTTGC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCATCTGTGAAATGGGAAGAGTGAGAGTCCTTTCCACAAAGGGTTGC  398

seq1  TAGGAGGATTAAATTAGGTCATATATGTGCAAGCATCTGTTTTTTATTTT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGGATTAAATTAGGTCATATATGTGCAAGCATCTGTTTTTTATTTT  448

seq1  TAATTTAATTTAAAAAAACTTTTTATTGTTTTTTTGTGAATTTCATATCA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAATTTAAAAAAACTTTTTATTGTTTTTTTGTGAATTTCATATCA  498

seq1  TGCACCCTAATTCTACTCACCACCCCTCATAGTTGTCCTCTATCCTTACC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCCTAATTCTACTCACCACCCCTCATAGTTGTCCTCTATCCTTACC  548

seq1  ACCTCCCCCACAACAGAGGGGGAAAAATCTTGTGGAAGCTGTAGCGTGTC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCCCCACAACAGAGGGGGAAAAATCTTGTGGAAGCTGTAGCGTGTC  598

seq1  ACAGAGTGTCCCACAGTGTACCCTTTCATCCACACTCCATTTATTTATTT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGTGTCCCACAGTGTACCCTTTCATCCACACTCCATTTATTTATTT  648

seq1  ATTTATTTATTTATTTATTTATTTATTTATTTGAACAGGCTTCACCGATT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTATTTATTTATTTATTTATTTATTTGAACAGGCTTCACCGATT  698

seq1  AGCCTGTCATTCATTCATTCATTCATTCATTCATTCATTCATTCATTCAT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGTCATTCATTCATTCATTCATTCATTCATTCATTCATTCATTCAT  748

seq1  TCATTCATATGTATATGATTATACTGTAGCTGTACAGATGGTTGTGAGCC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCATATGTATATGATTATACTGTAGCTGTACAGATGGTTGTGAGCC  798

seq1  ATCATGTGGTTGCTGGGAATTGAATTCAGGTCCTCTGCTCACTGGGAATT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGTGGTTGCTGGGAATTGAATTCAGGTCCTCTGCTCACTGGGAATT  848

seq1  GAATTC  848
      ||||||
seq2  GAATTC  854