Query= MSMg01no045_i15.b1 MSMg01no045_i15.b1 CHROMAT_FILE:
MSMg01no045_i15.b1 PHD_FILE: MSMg01no045_i15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:31 2005
(641 letters)
>mm_chr12_110984139_110985180
Length = 1042
Score = 1189 bits (615), Expect = 0.0
Identities = 630/635 (99%), Gaps = 1/635 (0%)
Strand = Plus / Minus
Query: 7 gaattctctgacctctgaaag-cccccaccccagaggctttcctcctgtctgcctgaggg 65
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gaattctctgacctctgaaagtcccccaccccagaggctttcctcctgtctgcctgaggg 782
Query: 66 gcagacattttcacttgactcactggatgagaaaagtcctttatttgtcttttcttcttc 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gcagacattttcacttgactcactggatgagaaaagtcctttatttgtcttttcttcttc 722
Query: 126 tcaaacaatagataaatctagtaattttgcttttaataaaagtctgcaccgagcaggagg 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tcaaacaatagataaatctagtaattttgcttttaataaaagtctgcaccgagcaggagg 662
Query: 186 gaccatcctcttagggtctccaatgaatttggagtgtgcgtgtcggttgttgcttggcac 245
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 661 gaccatcctcttagggtctccaatgaatttggagtgtgcgtgtcggtggttgcttggcac 602
Query: 246 cccagctgacattccatcttgtacataatactcccttggtggctgaggtacctggggctt 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cccagctgacattccatcttgtacataatactcccttggtggctgaggtacctggggctt 542
Query: 306 tccccatcggtgatgcagagactaggggtagcctatctgtggatgccttggtgtgactgc 365
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 541 tccccatcggtgatgcagagactaggggtagcctatctgtggatgccgtggtgtgactgc 482
Query: 366 gcttacactggagcaattaaatggagagatcggcagccttcttgcacgcgtttaatatat 425
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 481 gcttacactggagcaattaaatggagagatcagcagccttcttgcacgcgtttaatatat 422
Query: 426 tccaaagatgtgtcattaacagcaatttccatctccaaatgttcccatttgcttaggtcc 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tccaaagatgtgtcattaacagcaatttccatctccaaatgttcccatttgcttaggtcc 362
Query: 486 atgcataaaatattagccctgacagcagctcaggcctgctgcacgagggcctccgagggg 545
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 361 atgcataaaatattagccctgacagcagctcaggcctgctgcacgagggcctctgagggg 302
Query: 546 cctctggcttgctgccacggagacgttcacggagtggagggtgggggttgtgctcagatg 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cctctggcttgctgccacggagacgttcacggagtggagggtgggggttgtgctcagatg 242
Query: 606 aatttgaagcctagcatgagacccccagctacaaa 640
|||||||||||||||||||||||||||||||||||
Sbjct: 241 aatttgaagcctagcatgagacccccagctacaaa 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1042
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1032
Effective search space: 651192
Effective search space used: 651192
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no045_i15.g1 MSMg01no045_i15.g1 CHROMAT_FILE:
MSMg01no045_i15.g1 PHD_FILE: MSMg01no045_i15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:31 2005
(487 letters)
>mm_chr12_110968136_110969022
Length = 887
Score = 884 bits (457), Expect = 0.0
Identities = 478/487 (98%), Gaps = 4/487 (0%)
Strand = Plus / Plus
Query: 1 aatttgtcattggaagaatcttctggaaggagagaggacagtagacaagaggccccggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatttgtcattggaagaatcttctggaaggagagaggacagtagacaagaggccccggtt 260
Query: 61 ttcctgtcagagatctctgagaatatttgaggtcattcatgttctgtttgcttattgtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcctgtcagagatctctgagaatatttgaggtcattcatgttctgtttgcttattgtga 320
Query: 121 acgagacacagttagcttccttttgactatcaaactctgcttttttgaagggctccctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 acgagacacagttagcttccttttgactatcaaactctgcttttttgaagggccccctgc 380
Query: 181 acaagcgatatgagactgcctgccttgtgtgagccttggatgagccctgcagctccttcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaagcgatatgagactgcctgccttgtgtgagccttggatgagccctgcagctccttcg 440
Query: 241 agatgctccttggatattcctgatggagaagaccgaccccgaggaagcttggtcctgctt 300
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 441 agatgctccttggatattcctgatggagaagaccaaccccgaggaagcttggtcctgctt 500
Query: 301 tcgatgagcttgctgtgctttcacggacacccttcgtatcttctaccagttttcagtgcc 360
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 501 gcgatgagcttgctgtgctttcacggacacccttcgtttcttctaccagttttcagtgcc 560
Query: 361 agggtgcgcttgaaaggagagctgatgccagggctatagccttccccagccagagcatgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agggtgcgcttgaaaggagagctgatgccagggctatagccttccccagccagagcatgt 620
Query: 421 gggccaaaccctttctggatggctaggcagtggggagaagccatgagatagatgcttgag 480
||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 621 gggccaaaccctttctggatggctaggcagtggggagaagccatgagatgg----ttgag 676
Query: 481 aagtagt 487
|||||||
Sbjct: 677 aagtagt 683
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 887
Length adjustment: 10
Effective length of query: 477
Effective length of database: 877
Effective search space: 418329
Effective search space used: 418329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
