CAAAATTTGCGGCGCTAAACGACTCCTATATGCAGAAATCCGCGGAATTC
ATTATCCTTACAACTGTGGAAATAAAAACAAAAACTTTGAGATTTCATCT
TATCTTAATCAACAATCAAGGAATGTCAGACAACAACGTTGGTAAGGATG
TAGAAAATAGAATCCCCCATTCACTGTTGGTAAGATTTCAAACCACGGCC
ACTATCTGGAAAAAATGAACAATTCTAAAAAAATGTAAGTATAAAACATA
TGAATCAGCTATATCACAAGTTGCCAAGTGCTCAAAGGACTCAACATGCA
ACTTGTTACAAAGTCACACCTGGTCAAACTGGAAAGAGGAATTCAACATG
AGGTGTCCATCCCCAGTGGATACATCTATAACATGACCTTTGCAAATCTG
GATCAGGGGACACATAGGGTGAAATGGCATGAAAATTTAAGAGTCAGCAA
CCAGAAAACCTACTATGTGATGTCGTCATGAAACAGAACTTAAGATTTAC
CCATGAAATCTTAACAAGATGGCTGCCTAAACGAGACTTTTTCTATACCA
ACATCAGTTAACATGCCAACACAGATGGGCAAAATTTTCCAAGACCTTAT
CTCTAGACAACAAACAACAGATAATTAATGAATTGTGAGAGAGGAGATTA
ACCTTTCTCAGGTATGAAGAAATTGCGAT

CAATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAGAATTTAGTTCTATGGTTTAATTTGTT
TTTGTGGTTTGGTTTGGTTTTGATTTTGTTTTGTTTTGTTTTGTTTTGAT
ATTACAATGAAAAATTAAGAGAACCCATACTTTAATTGCTATTTTAAGGT
CTCAAATTAAGTGCATAGAGTTTGTCAGTTGGTACACTTTAGAATACATT
AAATTTAGAGTAGAATAACTTTGTAGAAGAGTATATAAATAAAAAAAGTT
TTAAAACGTATTTTAAATGTATTACAGGTTAATTATGCACAATTGTTTTA
TTACAAACAATCCCTATTTTAATTTCCTTTCTTACACACTGATCCATTAT
TCACCACAGATAACCCCCTTTTCTATTATATGTCTTTTTAAAAAACACTT
TCTCCTTCTTTCTTTCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT
TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTTTTTTTTTTTTT
GGTTTTGGTTTTGGTTTTGGTTTTGGTTTTGGGTTTGNTGTTTTTCCTTT
TTTTTTTTTTTTTTTTTTTTCTTTTTNTTCCTCTTCCCCTCTCTTTTCTT
CCTCCTTCTTCCTCTCTCTCTCCCTCTCCCCT

Query= MSMg01no046_m23.g1 MSMg01no046_m23.g1 CHROMAT_FILE:
MSMg01no046_m23.g1 PHD_FILE: MSMg01no046_m23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:03 2005
         (504 letters)



>mm_chr12_49051353_49052255
          Length = 903

 Score =  725 bits (375), Expect = 0.0
 Identities = 396/403 (98%), Gaps = 2/403 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   atttagttctatggtttaatttgtttttgtggtttggtttggttttgattttgttttgtt 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 atttagttctatggtttaatttgtttttgtggtttggtttggttttgattttgttttgtt 263

                                                                       
Query: 64  ttgttttgttttgatattacaatgaaaaattaagagaacccatactttaattgctatttt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttgttttgttttgatattacaatgaaaaattaagagaacccatactttaattgctatttt 323

                                                                       
Query: 124 aaggtctcaaattaagtgcatagagtttgtcagttggtacactttagaatacattaaatt 183
           ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaggtctcatattaagagcatagagtttgtcagttggtacactttagaatacattaaatt 383

                                                                       
Query: 184 tagagtagaataactttgtagaagagtatataaataaaaaaagttttaaaacgtatttta 243
           ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 384 tagagtagaataactttgtagaaaagtatataaataaaaaa-gttttaaaacgtatttta 442

                                                                       
Query: 244 aatgtattacaggttaattatgcacaattgttttattacaaacaatccctattttaattt 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aatgtattacaggttaattatgcacaattgttttattacaaacaatccctattttaattt 502

                                                                       
Query: 304 cctttcttacacactgatccattattcaccacagataacccccttttctattatatgtct 363
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 cctttcttacaccctgatccattattcaccacagataacccccttttctattatatgtct 562

                                                      
Query: 364 ttttaaaaaacactttctccttctttctttcttccttt-cttt 405
           ||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 563 ttttaaaaaacactttctccttctttctttctttcttttcttt 605


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 62
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 903
Length adjustment: 10
Effective length of query: 494
Effective length of database: 893
Effective search space:   441142
Effective search space used:   441142
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)