CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTTTGTTCAGCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTC
TGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTA
TCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTTTT
TGTCCTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTA
GGTCCCATTTGTCAATTCTCGATCTTACAGAGCAAGCCATTGCTGTTCTG
TTCAGGAATCTTTCCCCTGTACCCATATCTTCAAGGCTTTTCCCCACTTT
CTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCC
ACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCATT
CTTCTACATGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATGCT
GTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGAC
CATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTCT
ACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACAATTGCCCT
GTAGTAAAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGTTC

CGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCCTTGAAGAGGGAACAATATTTATCT
TTATGTTTTAGAATTAAAATTGGGTTAAGACATGTAGTCAACATCCTCAC
TTAGTTTCAACTATTTTAGTGAATATTATTTTTAAACATAATAAGTCCTG
GTTAGGTTTTTATGCCCTCACAATACAGTTATGGTCGTGACATGGCCAAA
GAAAATTACGTGAATAATAAAGTTCAAAAGCTAAGTACGATACCACAAAA
GCTATGGTGTTCTGTGGGTTATTATGAGATAATATAAAAACACATAGATA
TAGTTAATTCTGCTTCATGGGATTTACTAATTCCAAATGGAAAGAAAAAA
AGATTATGTAATCCCCCAACTATTCATTTTAATGAATGTTTATCACCTAT
TTTGTACAAGCCACTCTCCTAGACTTTCTGAGTAAATAGAGGTACCACTG
ACCAAGTGGGGCAAATGCACCTACTTTGTGGTGCTGGCTTTCTAGAGAAA
TAAAGGTTGTGAGAATATACTTATAAATAGTAACATAAATAAAGTACATA
CTAGGTTAAAATTATCAAAACAAAATGAGAAAAACAATAAAAAGATTCTA
TGACATTGATAGCAGCTCATAAAGGTGGAATCACTGGTGTGATGAC

Query= MSMg01no046_n14.g1 MSMg01no046_n14.g1 CHROMAT_FILE:
MSMg01no046_n14.g1 PHD_FILE: MSMg01no046_n14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:05 2005
         (620 letters)



>mm_chr12_61063394_61064413
          Length = 1020

 Score = 1168 bits (604), Expect = 0.0
 Identities = 616/620 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tccttgaagagggaacaatatttatctttatgttttagaattaaaattgggttaagacat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 tccttgaagagggaacaatatttatctttatgttttagaattaaaattgggttaagacat 761

                                                                       
Query: 61  gtagtcaacatcctcacttagtttcaactattttagtgaatattatttttaaacataata 120
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 760 gtagtcaacatcctcacttagtttcaactattttaatgaatattatttttaaacataata 701

                                                                       
Query: 121 agtcctggttaggtttttatgccctcacaatacagttatggtcgtgacatggccaaagaa 180
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 700 agtcctggttaggtttttataccctcacaatacagttatggtcgtgacatggccaaagaa 641

                                                                       
Query: 181 aattacgtgaataataaagttcaaaagctaagtacgataccacaaaagctatggtgttct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 aattacgtgaataataaagttcaaaagctaagtacgataccacaaaagctatggtgttct 581

                                                                       
Query: 241 gtgggttattatgagataatataaaaacacatagatatagttaattctgcttcatgggat 300
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 580 gtgggttattatgagataatataaaaacacatatatatagttaattctgcttcatgggat 521

                                                                       
Query: 301 ttactaattccaaatggaaagaaaaaaagattatgtaatcccccaactattcattttaat 360
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 520 ttactaattccaaatggaaagaaaaaaagactatgtaatcccccaactattcattttaat 461

                                                                       
Query: 361 gaatgtttatcacctattttgtacaagccactctcctagactttctgagtaaatagaggt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gaatgtttatcacctattttgtacaagccactctcctagactttctgagtaaatagaggt 401

                                                                       
Query: 421 accactgaccaagtggggcaaatgcacctactttgtggtgctggctttctagagaaataa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 accactgaccaagtggggcaaatgcacctactttgtggtgctggctttctagagaaataa 341

                                                                       
Query: 481 aggttgtgagaatatacttataaatagtaacataaataaagtacatactaggttaaaatt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 aggttgtgagaatatacttataaatagtaacataaataaagtacatactaggttaaaatt 281

                                                                       
Query: 541 atcaaaacaaaatgagaaaaacaataaaaagattctatgacattgatagcagctcataaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 atcaaaacaaaatgagaaaaacaataaaaagattctatgacattgatagcagctcataaa 221

                               
Query: 601 ggtggaatcactggtgtgat 620
           ||||||||||||||||||||
Sbjct: 220 ggtggaatcactggtgtgat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space:   616100
Effective search space used:   616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)