Query= MSMg01no046_o21.b1 MSMg01no046_o21.b1 CHROMAT_FILE:
MSMg01no046_o21.b1 PHD_FILE: MSMg01no046_o21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:11 2005
(597 letters)
>mm_chr12_54907538_54908535
Length = 998
Score = 1118 bits (578), Expect = 0.0
Identities = 590/594 (99%), Gaps = 1/594 (0%)
Strand = Plus / Plus
Query: 5 gaattctcactgcagaacaggcctggcttacaccctcccctagcccatcctgaaga-gat 63
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 205 gaattctcactgcagaataggcctggcttacaccctcccctagcccatcctgaagatgat 264
Query: 64 aaacagcgtgtctctttgtatgggtagtcaggcttttgtggccaaatcccttaataacac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaacagcgtgtctctttgtatgggtagtcaggcttttgtggccaaatcccttaataacac 324
Query: 124 aatcaccaggagccgggcattgtagaaacataggaaggaaccaggagtgtgagcagaata 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aatcaccaggagccgggcattgtagaaacataggaaggaaccaggagtgtgagcagaata 384
Query: 184 ttctttcaagtagacacatacatcctccagccttggcaatggcttcccacccgcagtttt 243
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 385 ttctttcaagtagacacatacatcccccagccttggcaatggcttcccacccgcagtttt 444
Query: 244 ctaggtaaaaattgtccagagagatgtacaatgggagagcatggctgcctcatattactt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctaggtaaaaattgtccagagagatgtacaatgggagagcatggctgcctcatattactt 504
Query: 304 gaggttcgaatcttttgtgtgtttcttcctattacaacctctgtgtgggcatttaatctc 363
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 505 gaggttcgaatcttttgtgtgtttcttcgtattacaacctctgtgtgggcatttaatctc 564
Query: 364 ttctttcctacaaaccaagtgcatttttatttattcctgaaaataaataaataaaaggta 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttctttcctacaaaccaagtgcatttttatttattcctgaaaataaataaataaaaggta 624
Query: 424 tctggcatttgcaccacggccacacagtgtgtctctgatgaggcctgggaggggggtgta 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tctggcatttgcaccacggccacacagtgtgtctctgatgaggcctgggaggggggtgta 684
Query: 484 aactctaacacaggctaagcagcagctctcacccagcacagcaggggatgggatgagccc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aactctaacacaggctaagcagcagctctcacccagcacagcaggggatgggatgagccc 744
Query: 544 ctgctatggcccagcctgtgggaatggctccccttggttctaggaaattcccct 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctgctatggcccagcctgtgggaatggctccccttggttctaggaaattcccct 798
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 998
Length adjustment: 10
Effective length of query: 587
Effective length of database: 988
Effective search space: 579956
Effective search space used: 579956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no046_o21.g1 MSMg01no046_o21.g1 CHROMAT_FILE:
MSMg01no046_o21.g1 PHD_FILE: MSMg01no046_o21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:11 2005
(570 letters)
>mm_chr12_55011757_55012726
Length = 970
Score = 826 bits (427), Expect = 0.0
Identities = 433/435 (99%), Gaps = 1/435 (0%)
Strand = Plus / Minus
Query: 1 tttaaggctgtgaacaaagggggcatgctgtatatagagaagtctcttgtgattattcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tttaaggctgtgaacaaagggggcatgctgtatatagagaagtctcttgtgattattcct 375
Query: 61 tcaacgtcacatatggagaaaaagtggctataactgaccctaggaagtattagacaaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tcaacgtcacatatggagaaaaagtggctataactgaccctaggaagtattagacaaatc 315
Query: 121 tgaacacacatagactactttacaatgcagcagctacctgaaatctggaggtaaccattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tgaacacacatagactactttacaatgcagcagctacctgaaatctggaggtaaccattg 255
Query: 181 ggctatctttatcatgaagcagggaatggtacccaggggtggggggagggaatgtggaga 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 254 ggctatctttatcatgaagcagggaatggtacccgggggtggggggagggaatgtggaga 195
Query: 241 tacggcttagaggccaagagtatgtattacccttgcagaagaccaggttttgtgttcatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 tacggcttagaggccaagagtatgtattacccttgcagaagaccaggttttgtgttcatt 135
Query: 301 gcccacatgggaaggcttataactgctttgtaactttagccaagaggatctgacaccttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 gcccacatgggaaggcttataactgctttgtaactttagccaagaggatctgacaccttt 75
Query: 361 tttctgacctctatgggttctcacatacacataatttaaaaacaatcttaaaaaaaagag 420
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 74 tttctgacctctatgggttctcacatacacataatttaaaaacaatctt-aaaaaaagag 16
Query: 421 tgccatgctagagtg 435
|||||||||||||||
Sbjct: 15 tgccatgctagagtg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space: 537600
Effective search space used: 537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
