GCGGCCGCTATACGACTCCTATTCCGAGAGGATCCGCGGAATTCAAACAA
ATGCTCTTAAAAGGCCTTCAAATGAATTTGATACCATTGATTTATCTGAA
ACTATAAACTGACCATTCTGCATCACAAAATCAACAAAGATGATTTTCAA
ATATGGTAAAAGAATGCAATGAATTAATGAACACAAAATTAGTAAAGCAT
AAACTTATGAAATTATTTTAGAGGGAATATTTCTTTGGTTTTTCAAAATA
AATATGAAAAATTAAGTATCCCTCAGAGAGAATAATTGACTATAATGCAC
ATATATGTGTATATATATACATATATATATATATATATTATAGTATGCTG
TAATTTCATTATTAAAGAAACAGAGAGACCTTTCAAATTACATCCATATT
TACACCCAAATTTACATCTCTAATGTATAAATCATATATATATATATATA
TGATACAGTAGATATACAGCTATAATTTGTAAACAGAAATGGAAGTCATT
GCAAACAACTTTCTTATATAAATATAGCTTTTAACAATTCTTATCACTCA
GTGAGACAGAAGGAAACTAATAAGAATCTGATATATTTTATTCTATATTT
TAAAAGTTATAGTCATACTTCAGCTGCTCAGATGTAAGCCAAACAAGACA
GGATGATAGGTGA

TCTTTTTTTTCTTTCTTTTCTTTCCCCTCCCTCTTTTCTTCCATTCTTTA
ACCCTTTTTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTCTTCTTTGAAGGTC
TGATAGCACTTTGCATTAAACCCGTCTGGTCCTGGGTTTTTTTGGTTGGG
AGACTATTGATGACTGTTTCTATATTTTTAGGGGAAATGGGACTGTTTAG
ATCATTAATCTGATCCTGATTTAACTTTGGTACCTGGCATCTGTCTAGGA
AGTTGTCCATTTCATCCAGGTTTTCTAGTTTTGTTGAGTATAGCCTTTTG
TAGTAGGATCTCATGATGTTTTGTATTTCTTCAGGATCTGCTGTTATGTC
TCCTTCTTAATTTTTGATTTTGTTAACTATGATACTGTCCCTGTGCTCTC
TAGTTAGTCTGATTAATGCCCTATCTATCTTTTTTATTTTCTCAAATAAT
CAGTCTTCTGGCTTGCTTGATTCTTTGCACAGTTCCTTTTGCTTCCACTT
TGTTGACCTCATCCTTGTTTTTGATTATTTTCCCTGCATTTACTCCCCTT
GGTTGAATATTTTCTCCTTACTTCTAGAGTTTCTACGTGTGCTGTCTTGC
TGTTAGATTATTCTTTCTTCACACCCTTTTTGTTCGTATTCCCTTCTATG
AACTTCCCTACTTACAAATGCCTTCA

Query= MSMg01no046_p07.b1 MSMg01no046_p07.b1 CHROMAT_FILE:
MSMg01no046_p07.b1 PHD_FILE: MSMg01no046_p07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:13 2005
         (578 letters)



>mm_chr12_6501933_6502910
          Length = 978

 Score = 1009 bits (522), Expect = 0.0
 Identities = 566/598 (94%), Gaps = 28/598 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcttaaaaggccttcaaatgaatttgataccattgatttatctgaaactataaactgacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893 tcttaaaaggccttcaaatgaatttgataccattgatttatctgaaactataaactgacc 834

                                                                       
Query: 61  attctgcatcacaaaatcaacaaagatgattttcaaatatggtaaaagaatgcaatgaat 120
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 attctgcatcacaaaaccaacaaagatgattttcaaatatggtaaaagaatgcaatgaat 774

                                                                       
Query: 121 taatgaacacaaaattagtaaagcataaacttatgaaattattttagagggaatatttct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 taatgaacacaaaattagtaaagcataaacttatgaaattattttagagggaatatttct 714

                                                                       
Query: 181 ttggtttttcaaaataaatatgaaaaattaagtatccctcagagagaataattgactata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 ttggtttttcaaaataaatatgaaaaattaagtatccctcagagagaataattgactata 654

                                                                       
Query: 241 atgcacatatatgtgtatatatatac--------------------atatatatatatat 280
           ||||||||||| ||||||||||||||                    ||||||||||||||
Sbjct: 653 atgcacatataagtgtatatatatacatatatatatatatatatatatatatatatatat 594

                                                                       
Query: 281 atattatagtatgctgtaatttcattattaaagaaacagagagacctttcaaattacatc 340
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 atattatagtatgctgtaatttcattattaaagaaacagagagacctttcaaattacatc 534

                                                                       
Query: 341 catatttacacccaaatttacatctctaatgtataaatcatatatatatatatatatgat 400
           |||||||| ||||||||||||||||||||||||||||||        |||||||||||||
Sbjct: 533 catatttatacccaaatttacatctctaatgtataaatc--------atatatatatgat 482

                                                                       
Query: 401 acagtagatatacagctataatttgtaaacagaaatggaagtcattgcaaacaactttct 460
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acagtagatatacagctataatttgtaaacagaaatggaagtcattgcaaacaactttct 422

                                                                       
Query: 461 tatataaatatagcttttaacaattcttatcactcagtgagacagaaggaaactaataag 520
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tatataaatatagcttttaacaattcttatcactcagtgagacagaaggaaactaataag 362

                                                                     
Query: 521 aatctgatatattttattctatattttaaaagttatagtcatacttcagctgctcaga 578
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 361 aatctgatatattttattctatattttaaaagttatagtcagacttcagctgctcaga 304


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 80
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 978
Length adjustment: 10
Effective length of query: 568
Effective length of database: 968
Effective search space:   549824
Effective search space used:   549824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)