Query= MSMg01no047_e02.b1 MSMg01no047_e02.b1 CHROMAT_FILE:
MSMg01no047_e02.b1 PHD_FILE: MSMg01no047_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:34 2005
(194 letters)
>mm_chr12_120593126_120593719
Length = 594
Score = 342 bits (177), Expect = 6e-99
Identities = 189/193 (97%)
Strand = Plus / Plus
Query: 1 tcaaaataaacttgaatcttgagggactctaactctttaaaagcattcaaaattcaaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcaaaataaacttgaatcttgagggactctaactctttaaaagcattcaaaattcaaatc 260
Query: 61 aaaatgacactgtacataatggaaacaatgctgtgaattactccttcactgataatattt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 aaaatgacactgtacataatggaaacaatgctgtgaattactccttcactgagaatattt 320
Query: 121 ttccaatttacatttattatcaaatgcaataaagatatatttatagtcacagataataat 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 ttccaatttacatttattatcaaatgcaataaagatatatgtatagtcacagataataat 380
Query: 181 gaacaacataaaa 193
||| ||||||||
Sbjct: 381 gaatgacataaaa 393
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no047_e02.g1 MSMg01no047_e02.g1 CHROMAT_FILE:
MSMg01no047_e02.g1 PHD_FILE: MSMg01no047_e02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:34 2005
(292 letters)
>mm_chr12_120765353_120766044
Length = 692
Score = 526 bits (272), Expect = e-154
Identities = 289/298 (96%), Gaps = 6/298 (2%)
Strand = Plus / Minus
Query: 1 tcagaacctatgtaaaagtacagaccaggcatgatcatgagaattgatgcccgtaatacc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 312 tcagaacctatgtaaaagtacagaccaggcatgatcatgagaattgatgcaggtaatacc 253
Query: 61 tgtgcttcagtgggggcatgaaggtgaaaataaaggcactggatgtgagatcacaagcaa 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tgtgcttcggtgggggcatgaaggtgaaaataaaggcactggatgtgagatcacaagcaa 193
Query: 121 atgcctgggggtttcctggctgccaatatagttctagtttcaatgagaaagcctgtctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 atgcctgggggtttcctggctgccaatatagttctagtttcaatgagaaagcctgtctca 133
Query: 181 tggaataaggtcaagtgtggtagaggaggactcctagaatgttctctggccttccctgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tggaataaggtcaagtgtggtagaggaggactcctagaatgttctctggccttccctgca 73
Query: 241 tacatacctgtacacacacacacacaca------tacacacatacatgcatgcatgac 292
|||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 72 tacatacctgtacacacacacacacacacacacatacacacatacatgcatgcatgac 15
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
