BAC end | BAC-end 1 | BAC-end 2 |
---|
end name | MSMg01-048A07.T7 (MSMg01no048_a07.b1) | MSMg01-048A07.TJ (MSMg01no048_a07.g1) |
ACC | AG277892 | AG277893 |
length | 1,227 | 1,355 |
length of high quality (start - end) | 234 (135 - 368) | 59 (69 - 127) |
definition | CHROMAT_FILE: MSMg01no048_a07.b1 PHD_FILE: MSMg01no048_a07.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 12:08:29 2005 | CHROMAT_FILE: MSMg01no048_a07.g1 PHD_FILE: MSMg01no048_a07.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 12:08:29 2005 |
singlet/doublet | singlet | --- |
---|
BLAST hit | unique | no hit data |
---|
sequence | CTATGGGCCTATAXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAAACA
AATGATCTTAAAACCCTTACAAATGAATTTGATACCATTGATTTATCTGA
AACTACTATACTGACCATTCTGCCCCCCCCAACCAACAAAGATGATTTTC
AAATATGGTAAAAGAATGCAATGAATTAATGAACACAAAATTAGTAAAGC
ATAAACTTATGAAATTATTTTAGAGGGAATATTTCTTTGGTTTTTCAAAA
TAAATATGAAAAATTAAGTATCCCTCAGAGAGAATAATTGACTATAATGC
ACATATATGTGTATATATATACATATATATATATATATATTATAGTATGC
TGNAATTTCATTATTATATAATTATATCATACCTTCTCAACTACTTCCTT
TTTTTTTTCCATACTTACATCTCTAATGTATAATTCATATATATATACCC
CCCCTGATCCATTTATATTTTTTTCTATAATCTTGTATTTTTAAATTCTA
TTTTTTTTCATCTTCTTTTTTATATTATTATTTCCTTTTATTTTTTTTAT
TCTTTTTCTTTTCTATTTTTTTTTTTTTCATTCTCTATTTTTTTATTTTT
ATTTTTTTCTTTTTTTTTTCTTTTTTTTTTTTAATTTTTTTTTTTATTTT
TCTTTTTTTTTCTTTTTTTTTTTAATATTTTTATTTTTATATATATTTTT
TATTTTTCTTTTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTATACAT
TTTCTTTCTATTCTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTCTCACA
TTCTTTTTTTTCTTTCCTTCTTCTTTTTTATTTAATTTATTTTTTTTATT
ACTTTAATTTTTTTTTTTTTTTTTTTTTTCTTTACTTCAACTTTTTCTAT
CTATCTTTTTTTTCTCTTCTTTTACTTTCCCTCTTATTTTATTTTTCATT
TTTTCTTACTTTTTTTTTTTTTTTTTCTCTTATTTTATTTAATTTTTATT
TATTTATTTTTTTATTTTTTTATTTTTTATTTTTTCATTTTATTTTTTTT
TTTTTCTCCTCATTTTCTTTTTTATTTTATTTTCCTTTCTTTTTTTACAT
TTTTTTTATTATATNTTTTTTCTTTTATCTTTTAATCTCTTCTTTTTTTT
TTCTTTCTTCTTTTATTTTTATCTTACACTTTTATATATTTATATTTCTT
ATTTTTTTTAATTCTTTATTTTCTCTT
| TTTTTAGCGTTGGTANCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCTCTTTCTTCTTTGAAGGTCTGATAGCACTTT
GCATTAAACCCGTCTGGTCCTGGGTCCCCCCGCCCGCCAGACTATTGATG
ACTGTTTCTATATTTTTAGGGGAAATGGTATTGTTTTTTTTTTTTTTTTT
TNTTATTTTTTTTATTTTTTTTTTTTTTTTTTTTATTTTTTTTTTTTTTT
TTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTATATTT
TTTTTTTTTTTTCTTTTTTTCTTTTTTTTTTTATTATTATTCTTTTTTTT
TTTTTTTTTTTTTTTTTTTTCGTTTTTTTTTTTTTTTCTATTATTTTATT
TTTTTTTTTTTTTACTTTCTTCTATTCTTTTTTTTTTTTTTTTTTTCATC
CTCTCCTTTTTTATTTTTTTTTTTTTTTTATTTCTTTTTTTTTCTTTTTT
TATTTTTTTTTTATTTTTATTTTCTTTTCTTTTCTTTCTTTTTATTTCTT
CTTTTTTTTTTTTTTTTTTTTTTTATTTTTGTTTTTTTTTTTTTCTTCTT
TTTTTTTTTTTTATTTTTTTTTTTTTTTTTTTTATTATTTCTTTTTTTTC
TTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTCTTTTTTTCCTATTATATTATTATTTTTGTTTTTTT
ATATTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATT
TTTTTATTTTTTTTTTTATTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTT
TTTTTTTTTTTTCATTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTA
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTTATTTCTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTT
TTTTATTTTTATTTTTTTTTTTATTTTTTTTTTTATATTTTTTTTATTTT
TTTTTTTTTTTATTTCTTTTTTTTTTTTTTATTTTTTTCTTTTTTTTTTT
TTTTTTGTAATATTATGTTATTTTTTCTTTTTGTTTATTTTTGTATTTTA
TTTTTTTTTATTTTCTTTTTTTTATTTTTTTGTTTTGTTTATTTTTTTTA
TTTTCTTATTTTTTATTTTTGTTTTTTTTTTTTTATTTTTTGTTTTTATG
TTTTAATTTTTATTTTTTTTTTTATGTTTTTATATTTTTTTTTTTTTTTA
TTTTT
|
quality values | Open.Hide. 6 6 6 8 8 10 9 8 8 8 10 8 8 8 15 17 29 28 24 26 23 24 24 21 21 42 37 34 37 34 42 42 37 42 42 48 43 57 57 43 47 47 42 42 36 36 36 36 42 50
50 36 53 50 50 50 37 37 37 23 23 11 11 11 12 11 10 9 9 9 10 19 27 41 47 47 59 59 59 59 57 57 57 57 53 53 43 42 42 38 38 38 36 53 36 36 33 50 50 50
41 25 14 10 10 9 9 9 9 11 19 22 39 37 39 41 32 32 24 26 20 23 19 20 22 24 24 16 16 12 12 11 11 16 18 25 30 34 47 59 59 59 59 59 59 59 57 53 53 57
53 53 53 53 53 53 50 50 50 53 53 68 68 68 68 68 68 68 68 68 68 57 57 57 54 54 54 54 54 54 59 57 59 59 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68
68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 59 59 59 59 59 52 52 52 59 59 57 57 57 57 57 57 57
68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 68 68 68
68 68 68 68 68 68 68 68 68 44 44 23 23 28 35 43 42 42 42 43 44 68 68 59 59 59 59 59 59 59 48 48 48 59 59 59 59 59 59 59 59 59 59 48 42 47 41 47 44 27
23 3 0 3 22 21 34 32 28 28 28 37 37 36 26 11 11 8 8 9 11 8 8 8 8 8 8 8 8 8 8 12 17 8 8 6 7 8 8 10 13 16 20 18 21 12 10 8 8 8
8 11 28 27 13 9 11 9 9 18 11 12 12 15 12 27 23 40 39 30 30 28 43 37 36 22 19 10 10 10 10 10 10 15 15 32 32 33 31 30 31 28 28 17 18 11 11 11 11 15
15 15 12 9 9 9 8 8 8 8 8 8 15 8 8 6 6 8 8 9 9 10 10 11 11 10 10 10 10 10 10 19 23 23 26 19 13 13 16 16 23 21 15 13 12 10 10 10 10 10
11 15 15 15 16 13 9 9 9 9 10 12 10 9 9 8 23 19 12 12 10 9 8 8 8 10 10 10 10 15 14 10 10 8 8 9 19 13 15 10 10 10 17 12 12 12 15 15 19 12
13 10 8 8 10 8 10 10 12 12 8 11 12 11 12 12 13 16 16 9 9 9 9 9 9 17 17 9 8 8 8 8 8 8 6 6 6 6 8 8 11 12 10 8 8 8 8 8 10 9
13 15 19 19 17 10 8 8 8 8 10 10 12 10 10 10 8 12 8 8 8 9 15 19 19 22 17 15 8 8 7 8 8 11 10 13 10 10 10 15 15 10 8 8 8 8 8 13 17 8
8 8 8 8 8 12 11 19 15 13 8 8 8 8 10 10 12 10 8 8 8 8 8 8 8 8 6 6 8 8 10 11 11 11 16 16 16 10 8 8 6 6 8 8 10 11 8 8 8 16
11 11 15 16 10 10 6 6 10 8 12 15 15 8 8 6 6 10 12 11 10 10 8 8 8 8 8 8 10 8 9 8 8 12 14 14 14 17 24 23 16 12 10 6 6 8 8 8 8 8
13 13 8 8 8 11 8 8 8 8 8 8 6 6 11 10 12 9 9 12 11 10 11 12 21 21 28 24 19 20 18 16 11 11 18 19 20 20 24 21 24 17 22 12 11 12 15 8 8 8
8 8 8 8 11 11 15 10 11 13 11 13 9 10 8 8 8 10 6 6 8 8 8 8 8 9 10 10 10 13 13 12 9 8 8 10 10 7 6 8 6 8 8 8 10 10 8 8 8 8
9 9 9 14 8 8 8 8 8 10 11 12 10 8 8 8 8 13 11 8 8 10 13 10 9 9 9 14 9 9 8 12 11 13 8 8 8 8 8 8 8 16 24 23 18 13 10 10 10 9
10 8 10 8 8 8 8 12 19 15 20 16 13 10 11 11 11 11 11 11 13 10 9 9 8 10 8 9 12 12 9 9 8 8 11 10 10 13 15 10 10 10 12 10 10 8 8 8 8 10
10 6 6 7 6 8 8 8 8 8 10 9 13 9 10 10 12 12 14 14 18 12 13 13 13 8 6 6 7 11 10 14 17 13 15 10 10 8 13 8 8 10 12 14 14 11 11 11 12 11
11 12 15 24 12 15 11 21 21 14 12 12 8 8 8 10 18 18 16 17 11 11 11 9 8 8 7 12 9 6 8 13 10 10 6 6 8 8 8 12 8 8 8 8 13 9 9 11 14 10
11 13 10 10 8 8 8 10 11 8 8 8 8 10 9 19 15 9 9 8 10 11 10 12 12 10 10 8 8 8 10 10 6 6 6 6 8 6 8 8 13 16 20 13 12 8 8 8 10 8
8 8 13 11 8 8 8 8 8 8 8 9 10 3 0 3 12 12 10 12 12 17 18 17 17 10 7 7 7 8 13 15 10 10 10 8 8 6 6 8 8 8 8 8 17 15 23 23 22 19
13 8 8 8 11 8 9 9 7 7 8 8 8 8 10 10 19 12 8 8 6 6 6 6 8 10 10 9 9 10 11 11 8 8 8 19 15 14 10 15 7 8 8 8 8 8 8 8 8 6
6 6 7 7 12 9 8 8 9 10 6 7 8 8 9 8 10 9 9 13 13 10 10 8 10 8 6 | Open.Hide.21 23 23 23 16 8 3 6 6 6 6 6 6 6 3 0 3 7 7 8 8 8 11 11 15 9 7 7 7 8 8 12 28 21 23 16 17 17 30 26 33 28 28 36 26 26 17 14 14 25
32 43 42 57 57 57 53 53 53 44 44 39 50 42 34 23 13 9 9 9 9 9 16 14 16 23 24 32 37 37 39 44 44 53 53 53 53 53 53 53 53 57 57 57 50 50 50 53 53 53
57 57 53 53 53 53 57 57 34 34 18 19 12 15 15 32 30 40 41 41 41 39 22 13 9 9 9 9 11 12 8 8 10 10 10 9 9 9 9 19 17 27 31 31 31 33 50 59 59 43
35 35 39 43 48 53 37 40 47 47 42 50 57 57 57 57 57 44 37 37 21 21 11 18 16 13 8 8 8 6 9 9 9 16 11 11 13 12 14 16 15 17 13 13 15 17 15 14 13 11
3 0 3 8 6 6 6 8 21 21 16 14 9 8 8 8 8 8 19 17 20 19 19 9 9 9 9 9 10 10 19 22 17 12 9 9 13 15 19 25 16 14 13 17 14 11 11 18 19 19
15 10 14 15 17 10 10 11 17 25 37 34 31 20 19 11 16 11 10 13 9 9 15 12 21 15 14 9 10 8 7 7 7 13 11 11 11 18 19 15 8 8 8 6 6 7 8 8 8 11
17 17 18 19 21 19 32 27 37 22 22 15 15 9 13 8 8 8 8 8 6 6 7 7 17 15 18 20 16 15 21 10 8 8 10 10 10 10 8 8 8 8 8 15 19 21 22 33 21 24
24 24 24 28 48 37 28 16 10 10 10 19 19 21 13 11 11 15 19 10 9 9 9 17 9 11 11 11 18 19 13 13 8 10 10 15 15 14 7 7 8 8 6 6 10 12 8 6 6 9
11 19 21 21 32 39 32 32 26 19 22 21 9 9 9 8 15 8 8 8 10 10 10 10 10 9 9 8 10 8 12 13 11 22 27 27 29 23 24 15 11 9 12 14 8 8 6 6 8 7
8 10 13 8 10 10 10 10 8 8 17 7 7 8 13 12 22 23 17 11 15 13 8 8 8 8 17 21 11 10 8 15 15 19 15 8 8 9 13 8 8 8 9 10 10 17 8 8 8 8
9 9 12 16 16 12 11 10 16 14 15 9 9 9 9 10 10 8 8 10 19 23 37 33 33 28 21 24 19 19 8 8 8 9 9 17 19 10 10 10 19 15 13 8 8 8 11 10 13 10
10 10 12 19 23 19 12 12 11 9 12 8 15 11 11 15 12 19 19 24 17 15 15 11 10 13 17 22 19 11 11 11 23 23 37 37 41 37 20 20 17 19 10 10 13 19 8 8 8 13
9 11 11 10 9 9 9 15 15 13 10 8 8 6 9 9 9 13 11 10 17 24 37 37 21 28 28 18 19 15 9 9 8 8 6 6 8 9 10 15 15 12 8 8 8 8 9 13 10 11
10 12 10 10 19 15 14 14 11 11 11 15 21 12 21 11 19 19 18 20 20 15 13 6 6 8 19 25 30 23 21 14 14 14 17 21 22 15 19 19 22 23 25 31 34 25 25 25 26 27
15 15 12 21 17 10 10 13 19 19 21 12 12 19 17 19 10 8 8 15 15 17 17 19 9 8 6 8 8 8 7 10 10 10 8 8 8 8 10 10 11 9 6 6 7 7 9 13 19 8
8 7 7 6 8 8 8 13 8 9 9 9 9 21 19 24 23 24 20 18 16 15 15 21 29 34 42 39 28 23 23 23 28 24 28 28 28 24 28 28 19 19 9 9 8 15 10 9 9 9
7 8 8 9 9 11 11 23 20 28 28 23 22 11 9 9 8 8 8 15 15 20 22 18 17 11 17 8 8 10 22 21 27 21 20 14 16 14 12 24 16 16 10 10 12 24 23 31 30 22
17 23 18 24 24 28 28 25 20 15 14 9 10 10 16 15 10 12 12 13 9 11 10 10 10 12 21 16 22 21 19 10 10 10 19 14 18 19 15 8 8 8 13 15 11 11 12 11 9 9
9 9 9 9 16 16 10 9 8 10 8 11 15 19 25 28 30 36 32 30 28 21 19 24 24 39 42 39 39 33 26 15 8 8 8 8 10 13 17 21 14 9 16 9 9 15 9 10 12 12
19 19 20 14 14 14 19 19 37 28 24 16 14 12 12 25 30 37 41 41 33 19 19 10 9 9 10 13 16 14 19 17 19 9 7 7 8 8 8 8 17 15 20 28 33 19 19 10 10 8
8 16 21 23 25 21 28 28 29 19 15 8 8 8 8 8 17 10 11 11 11 14 16 23 25 47 33 31 29 24 21 20 20 15 14 8 8 8 10 10 8 6 7 10 9 15 18 18 23 33
23 23 18 11 9 13 12 12 15 8 6 6 17 9 10 10 9 12 11 19 12 9 9 9 9 9 9 9 21 22 37 22 23 9 10 10 9 13 19 19 25 23 15 13 8 8 8 17 19 17
11 8 8 8 8 8 10 10 18 19 9 9 8 8 8 9 9 11 9 11 11 12 18 19 18 27 20 15 11 6 7 10 22 30 39 36 21 20 23 20 28 28 27 25 12 12 12 30 25 37
37 19 18 9 9 8 8 9 9 8 8 8 8 8 8 8 9 9 9 9 12 21 19 15 13 10 12 10 12 15 19 9 9 9 15 10 10 10 14 23 16 9 9 9 16 15 23 25 11 10
10 10 10 16 15 19 11 12 6 6 8 15 8 8 8 10 12 12 10 12 10 7 8 6 6 13 8 9 7 7 8 6 6 13 10 9 7 8 8 8 9 10 19 24 31 30 24 19 15 17
12 11 11 10 8 6 7 7 8 10 15 13 15 11 17 10 20 12 10 9 9 9 18 13 9 9 9 9 9 9 10 10 15 7 7 7 13 10 11 10 9 9 9 13 17 9 8 8 8 8
8 11 11 6 6 8 8 15 16 16 9 9 9 16 14 17 17 16 16 14 12 15 10 8 10 9 9 15 17 17 8 8 8 8 8 11 10 12 24 19 22 22 28 15 9 9 9 9 9 8
12 6 8 8 7 |