Query= MSMg01no048_d13.b1 MSMg01no048_d13.b1 CHROMAT_FILE:
MSMg01no048_d13.b1 PHD_FILE: MSMg01no048_d13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:08:55 2005
(119 letters)
>mm_chr12_96307420_96307938
Length = 519
Score = 223 bits (115), Expect = 4e-63
Identities = 118/119 (99%)
Strand = Plus / Minus
Query: 1 cccctaggagcccaggaaactcagaatccatcacctctgttcaaagtccacctcccttct 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cccctaggagcccagcaaactcagaatccatcacctctgttcaaagtccacctcccttct 260
Query: 61 ggtctgtgtcttctgctgggcagataatcagcatgtctgtcattctgaagaccccacag 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ggtctgtgtcttctgctgggcagataatcagcatgtctgtcattctgaagaccccacag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 119
Length of database: 519
Length adjustment: 8
Effective length of query: 111
Effective length of database: 511
Effective search space: 56721
Effective search space used: 56721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no048_d13.g1 MSMg01no048_d13.g1 CHROMAT_FILE:
MSMg01no048_d13.g1 PHD_FILE: MSMg01no048_d13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:08:55 2005
(680 letters)
>mm_chr12_96268729_96269809
Length = 1081
Score = 687 bits (355), Expect = 0.0
Identities = 423/457 (92%), Gaps = 20/457 (4%)
Strand = Plus / Plus
Query: 239 tcttaacaatggtttttatttcttacacatttcttgttattttacttaccatttacatta 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tcttaacaatggtttttatttcttacacatttcttgttattttacttaccatttacatta 481
Query: 299 gaagagccaggtcctgtgaaaatatttcactgaatattaattttactttgaaatttgtct 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gaagagccaggtcctgtgaaaatatttcactgaatattaattttactttgaaatttgtct 541
Query: 359 tactatacagctaattattatggtgatgcttttaaaattatactatgttgtatatttaag 418
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tactatacaggtaattattatggtgatgcttttaaaattatactatgttgtatatttact 601
Query: 419 taga-----------------gtgctggtatcatattaccttgctgtgcttgcaacaaaa 461
|| | ||||||||||||||||||||||||||||| |||||||||
Sbjct: 602 taaatatcatatcatattactgtgctggtatcatattaccttgctgtgctcgcaacaaaa 661
Query: 462 aa-gctttataaaatcnaccaattatctgttaaaatggtgtctctataagtagaatctaa 520
|| ||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 662 aaagctttataaaatctatcaattatctgttaaaatgttgtctctataagtagaatctaa 721
Query: 521 agaattactaagttagcaatcattaagtacccttgaacacaggaatacaaatttccagga 580
|||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 722 agaattaccgagttagcaatcattaagtatccttgaacacaggaatacaaattaccagga 781
Query: 581 ataatgtacacttttttcnaactctgaaaatgtacattattgtaaacaatttttccaaag 640
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 782 ataatgtacacttttttcaaactctgaaaatgtacattattgtaaacaatttttcaaaag 841
Query: 641 att-actcaaagacaatcatttgatacattcttttag 676
||| |||||||||||||||||| ||||||||||||||
Sbjct: 842 atttactcaaagacaatcattt-atacattcttttag 877
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1081
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1071
Effective search space: 717570
Effective search space used: 717570
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
