Query= MSMg01no049_n16.b1 MSMg01no049_n16.b1 CHROMAT_FILE:
MSMg01no049_n16.b1 PHD_FILE: MSMg01no049_n16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:12:18 2005
(557 letters)
>mm_chr12_51055237_51056194
Length = 958
Score = 963 bits (498), Expect = 0.0
Identities = 543/558 (97%), Gaps = 1/558 (0%)
Strand = Plus / Plus
Query: 1 tggtttgcctatatatttttatagaatgtgcctgttgatacaagaaaaacaagatgggac 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggtttgtctatatatttttatagaatgtgcctgttgatacaagaaaaacaagatgggac 260
Query: 61 tcttgtaaagcaaccccatcctttactgaacgtttaatgcaggcttctagaaagaaaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcttgtaaagcaaccccatcctttactgaacgtttaatgcaggcttctagaaagaaaagc 320
Query: 121 acaaacattctacttttccaacgccagacttctgtgtccactcccaatcttctctaggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaaacattctacttttccaacgccagacttctgtgtccactcccaatcttctctaggga 380
Query: 181 gatgggagcttcgatctctgtcagggaatgtacccacttacttccgattttttt-ccact 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 gatgggagcttcgatctctgtcagggaatgtacccacttacttccgattttttttccact 440
Query: 240 ctcgtgtctcagtttccttcctgtctcccaaaaatgaaatttatttcggccacctctgaa 299
||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 441 ctcgtgtctcagtttccttcctgtctcccgaaaatgaaatttattttggccacctctgaa 500
Query: 300 cagatttgtgtgtgtatattttctgagaaattagattctccctatggatttttaaatcac 359
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 501 cagatttgtgtgtgtatattttctgagaaattagattttccatatggatttttaaatcac 560
Query: 360 ttttcagatcgagttcaaaactatgtaaactgttttgttgtcaggccaggcaggaacaga 419
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttcagatcgagttcaaaaatatgtaaactgttttgttgtcaggccaggcaggaacaga 620
Query: 420 gtatatcactcagcgaagagcaccgaatactatacgtgatctctaaatgacataactagt 479
|||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||
Sbjct: 621 gtatatcactcagcgaagagcaccgaatactataagtgatctttaaatgagataactagt 680
Query: 480 gagtaagtcaattaacatggccaataatgggacacaaatgcccctccacgagcaattgta 539
| ||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||||
Sbjct: 681 gggtaagtcaattaaaatggccaataatggaaaacaaatgcccatccacgagcaattgta 740
Query: 540 agacatttaacccaagga 557
||||||||||||||||||
Sbjct: 741 agacatttaacccaagga 758
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 958
Length adjustment: 10
Effective length of query: 547
Effective length of database: 948
Effective search space: 518556
Effective search space used: 518556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no049_n16.g1 MSMg01no049_n16.g1 CHROMAT_FILE:
MSMg01no049_n16.g1 PHD_FILE: MSMg01no049_n16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:12:18 2005
(586 letters)
>mm_chr12_51154786_51155771
Length = 986
Score = 702 bits (363), Expect = 0.0
Identities = 378/383 (98%), Gaps = 1/383 (0%)
Strand = Plus / Minus
Query: 1 ctgggttcatctcatcgatgaagaatgattaatgtatgtttataagtgtccataaacaat 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctgggttcatctcattgatgaagaatgattaatgtatgtttataagtgtccataaacaat 326
Query: 61 gaaaagcaccttctgaagaacacagaggaacaataggtaaaagtctgtagtctctggatt 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaacagcaccttctgaagaacacagaggaacaataggtaaaagtctgtagtctctggatt 266
Query: 121 gtgccttagtttctactcttttcatgaatttgttagactccctgggcctgtgatgtctaa 180
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gagccttggtttctactcttttcatgaatttgttagactccctgggcctgtgatgtctaa 206
Query: 181 aatatccttgaaatgccaagtcctaaatgggatacttcatcaatccctcccctcagggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 aatatccttgaaatgccaagtcctaaatgggatacttcatcaatccctcccctcagggct 146
Query: 241 caggaaattcagtggtagagaagacagaaagactataaaagtcagggggatggaagactc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 caggaaattcagtggtagagaagacagaaagactataaaagtcagggggatggaagactc 86
Query: 301 caaagaagcaaagccttctagatacaccaggactgctgcacatatatacaaactcatgtt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 85 caaagaagcaaagccttctagatacaccaggactgctgcacatatatacaaactcatg-t 27
Query: 361 atgagctctgtgtcagcgtcaca 383
|||||||||||||||||||||||
Sbjct: 26 atgagctctgtgtcagcgtcaca 4
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space: 562176
Effective search space used: 562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
