Query= MSMg01no052_h04.b1 MSMg01no052_h04.b1 CHROMAT_FILE:
MSMg01no052_h04.b1 PHD_FILE: MSMg01no052_h04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:04 2005
(527 letters)
>mm_chr12_15013895_15014821
Length = 927
Score = 754 bits (390), Expect = 0.0
Identities = 399/402 (99%)
Strand = Plus / Minus
Query: 126 tctactaaggagttgtttaggggctgaaaagatgactcagcactcagctgcacttgattc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927 tctactaaggagttgtttaggggctgaaaagatgactcagcactcagctgcacttgattc 868
Query: 186 tcttccaggagaactgagttacattcacagtatccatactggtctgctcctaaccccctc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 tcttccaggagaactgagttacattcacagtatccatactggtctgctcctaaccccctc 808
Query: 246 taactccaggtcttggggatctgactcccttttctagactccacaggcacccagatattc 305
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 807 taactccaggtcttggggatctgactaccttttctagactccacaggcacccagatattc 748
Query: 306 atggcaaacacccacaacaagcttgcatgctcacttaagagaaacaaaagtttccaaaaa 365
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 atggcaaacacccacaatgagcttgcatgctcacttaagagaaacaaaagtttccaaaaa 688
Query: 366 ggaatgctcatgaaaagagatttttaaatcataatgatatctaaattttctctagtcatt 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ggaatgctcatgaaaagagatttttaaatcataatgatatctaaattttctctagtcatt 628
Query: 426 tggtagtttttattgttgtattgaatatataattatctagactaagattgaagtgtttct 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tggtagtttttattgttgtattgaatatataattatctagactaagattgaagtgtttct 568
Query: 486 attatttattcctataactctgtagccgtaggttttaaatgt 527
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 attatttattcctataactctgtagccgtaggttttaaatgt 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no052_h04.g1 MSMg01no052_h04.g1 CHROMAT_FILE:
MSMg01no052_h04.g1 PHD_FILE: MSMg01no052_h04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:04 2005
(502 letters)
>mm_chr12_14928283_14929184
Length = 902
Score = 928 bits (480), Expect = 0.0
Identities = 495/502 (98%), Gaps = 4/502 (0%)
Strand = Plus / Plus
Query: 1 agctggaaatttatgttcaaatactgaacataactttcccaaattattccagagcccctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agctggaaatttatgttcaaatactgaacataactttcccaaattattccagagcccctt 260
Query: 61 tatgttcctacttcttatttataatacaatatatgggaattatagaacacaaattaggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatgttcctacttcttatttataatacaatatatgggaattatagaacacaaattaggag 320
Query: 121 caaatacataattattaaatgtttacttaagacaccaataagctaggttaggttgcttaa 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 caaatacataattattaaatgtttacttaagacaccaatgagctaggttaggttgcttaa 380
Query: 181 catctttgattcataatttcctcacccctgacacacctataacataaacactcataagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catctttgattcataatttcctcacccctgacacacctataacataaacactcataagca 440
Query: 241 ccctgattattctgtctctgtctctgtgtctctgtctctgtctctgtctctctctctctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccctgattattctgtctctgtctctgtgtctctgtctctgtctctgtctctctctctctc 500
Query: 301 tctcttctccttttatttccagtcttacattctttctaggaaattctgtgggtatattta 360
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 t----tctccttttatttccagtcttacattctttctaggaaattctgtgggtatattta 556
Query: 361 aaatacagagttaagtgtgatacccagattctcatccacagagggtgttaataaccattt 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 aaatacagagttaaatgtgatacccagattctcatccacagagggtgttaataaccattt 616
Query: 421 attaatgaatctttgaaaatgacagtgtaaagaaaatattagggtaaattcaaagccttg 480
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 attaatgaagctttgaaaatgacagtgtaaagaaaatattagggtaaattcaaagccttg 676
Query: 481 caattccccacttgcttctata 502
||||||||||||||||||||||
Sbjct: 677 caattccccacttgcttctata 698
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
