NNNNNNNNNNNNTTTTNNNNCCATTTTTATGTTCTTCGGGGGGGGGGCGC
CAATTATAATTGTGGGGGGAAGAGGANTACTATTCGAAAAAGNANGNGGN
NNNNNNNGNATGCAAAAGGAGGGTTNNNNGGGNNNNNNGANNNNNNGGAG
NNNANNNNNNTGTTTTCTCCATNTGTGTGTTGTATANGAGGGNNGTTTAT
GATTTAGGGTTGGTAAAGAGAGTTTNNNAATATGTTGTGTGGGTTTTTGG
GTTATTGAAAGTGTGTTTTGGTTTAAAGAAGATTTGGAATTTTATGAGTT
TGTATTTGGGGATTTTTGATATTANAGNAAAAGTTTTTGATGTTTTGTTT
AGGAATGTTAGGTTTTTTTTTTTTAAAGAGAGGAGGGTGGGAAGGGGGAG
ATTTTTTTTTTTTTTGCCGCGGGAGGAGGGGGGGGTTATTGAGTTTGTTG
GAGTTGGGGTTTGTACAAAAAAAAAAAAAAGGGGTGGGGGGGGCGTGGGT
GTGGCTGAATGGGTTTAGGTTGGGGGGGGAGGATTTTGAGGAAATATGGT
GTATTTGTTTTGAATGTAAAGGTATTAAGATTTTTTGTGGAAAAGAATTG
AGGGGGATTGATTAGGTAGGGGGGGGTGAAGTTTTGGGGGAATATGAGTT
TGGGGTGGATGTGGAGGTGGGATGGGGGGGGTGGGGGGTTTAAGGTGGGG
GGTGGTATTTTTAAGTTAGGAAGGGGGAAATGGGTTGTTAAAGATGTTGA
GAGATTGGGGTTTGTGGGAGAAGATATGTAAGAATAAGTATTTTTTATAA
AN

NCCCCCCCNNNNNNNNNNNNNNNNNCCCCCCCGNGTCGCCTTATATTAAN
ANNNCCCCATGATATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGGAGTGATCCAGTGGT
AAAGAAAAGAAGAATACTAGATGAAAGCATGTAAACAGATGACATTTAGA
AGAGCTAGGAGGGTCTTAGAACAGAAAGAGTGATCACTCAATCACTGGGG
GAAAAATAGCAAGAGATAAGGGATATGCCTATCCCTGTGAAGACACAAGA
CAAACATTCTTTGGAGAGTAGTAATTGTAGGCTTCAATCTGTTATGAATC
TCTATGTGAACTTAATTAATATTTTATGAAATGCTACAATTTAACGTGAC
CTTTTGAAAATTAATGATCTAAATAGAACTTCAAGTGCAATATTGAATAG
ATATGGAAAGAGAAGACAGCCTTGTTTTGTTCCTGATTTTAGTGGAATTG
CTTTGAATTTCTGTCCATTTAATTTGATCTTGGCTATTAGCTTGCTGTAT
ATTGCCTTTAATATGTTTAGGTATGTGCCTTGTGTCACTGATCTGTCCAA
GATTTTTGTCAAAGGAGTTTTTCAGCATCTAATGAGACTATCACTTTTTT
CTTTCAGTTTCTTTATATGGTGGATTATCATTGACAGACTTTTGTTTGTT
GAACCATCCCTACCACTCTGGCAAGAAGCCTACTTGATCATGATGGATGA
TGTTTTTGACATGC

Query= MSMg01no054_i03.g1 MSMg01no054_i03.g1 CHROMAT_FILE:
MSMg01no054_i03.g1 PHD_FILE: MSMg01no054_i03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:42 2005
         (574 letters)



>mm_chr12_120997625_120998598
          Length = 974

 Score = 1079 bits (558), Expect = 0.0
 Identities = 570/574 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcaggagtgatccagtggtaaagaaaagaagaatactagatgaaagcatgtaaacagatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcaggagtgatccagtggtaaagaaaagaagaatactagatgaaagcatgtaaacagatg 260

                                                                       
Query: 61  acatttagaagagctaggagggtcttagaacagaaagagtgatcactcaatcactggggg 120
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acatttagaagagctaggggggtcttagaacagaaagagtgatcactcaatcactggggg 320

                                                                       
Query: 121 aaaaatagcaagagataagggatatgcctatccctgtgaagacacaagacaaacattctt 180
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaaatagcaagagataagggatatgcctatccctgtgaagacacaagacaaacattctt 380

                                                                       
Query: 181 tggagagtagtaattgtaggcttcaatctgttatgaatctctatgtgaacttaattaata 240
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 tggagagtagtaattgtaggcttcaatctgttatgaatctctatatgaacttaattaata 440

                                                                       
Query: 241 ttttatgaaatgctacaatttaacgtgaccttttgaaaattaatgatctaaatagaactt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttatgaaatgctacaatttaacgtgaccttttgaaaattaatgatctaaatagaactt 500

                                                                       
Query: 301 caagtgcaatattgaatagatatggaaagagaagacagccttgttttgttcctgatttta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caagtgcaatattgaatagatatggaaagagaagacagccttgttttgttcctgatttta 560

                                                                       
Query: 361 gtggaattgctttgaatttctgtccatttaatttgatcttggctattagcttgctgtata 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtggaattgctttgaatttctgtccatttaatttgatcttggctattagcttgctgtata 620

                                                                       
Query: 421 ttgcctttaatatgtttaggtatgtgccttgtgtcactgatctgtccaagatttttgtca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgcctttaatatgtttaggtatgtgccttgtgtcactgatctgtccaagatttttgtca 680

                                                                       
Query: 481 aaggagtttttcagcatctaatgagactatcacttttttctttcagtttctttatatggt 540
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 681 aaggagtttttcagcatctaatgagactatcatttttttctttcagtttctttatatggt 740

                                             
Query: 541 ggattatcattgacagacttttgtttgttgaacc 574
           ||||||||||||||||||||||||||||||||||
Sbjct: 741 ggattatcattgacagacttttgtttgttgaacc 774


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space:   543696
Effective search space used:   543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)