Query= MSMg01no054_m17.b1 MSMg01no054_m17.b1 CHROMAT_FILE:
MSMg01no054_m17.b1 PHD_FILE: MSMg01no054_m17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:04 2005
(324 letters)
>mm_chr12_11929400_11930123
Length = 724
Score = 559 bits (289), Expect = e-164
Identities = 300/305 (98%), Gaps = 3/305 (0%)
Strand = Plus / Minus
Query: 1 cctttcattttccctctttttaaacttgtaaatactaaattttcatttttgggattatat 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 305 cctttcattttccctctttttaaacttgtaaatactaaattttcattttggggattatat 246
Query: 61 tataattatgacatttctctgttccctttcctctctccaaaatctttttttt---attag 117
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 245 tataattatgacatttctctgttccctttcctctctccaaaatcttttttttaaaattag 186
Query: 118 gtattttcctcatttacattttcaatgctatcccaaaggtcccccatacacacaccccca 177
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 185 gtattttcctcatttacattttcaatgctatcccaaaggtcccccatacacaccccccca 126
Query: 178 atcccctacccacccactccccctttttggccctggcgttcccctgtactggggcatata 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 atcccctacccacccactccccctttttggccctggcgttcccctgtactggggcatata 66
Query: 238 aagtttgcaagtccaatgggcctctctttgcagtgatggcccactaggccatcttttgat 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 aagtttgcaagtccaatgggcctctctttgcagtgatggcccactaggccatcttttgat 6
Query: 298 acata 302
|||||
Sbjct: 5 acata 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no054_m17.g1 MSMg01no054_m17.g1 CHROMAT_FILE:
MSMg01no054_m17.g1 PHD_FILE: MSMg01no054_m17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:56:04 2005
(592 letters)
>mm_chr12_11825425_11826416
Length = 992
Score = 1145 bits (592), Expect = 0.0
Identities = 592/592 (100%)
Strand = Plus / Plus
Query: 1 agataaatttcatttaaaaatataaaagatttgtaatctgttatgtttattattaactgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agataaatttcatttaaaaatataaaagatttgtaatctgttatgtttattattaactgt 260
Query: 61 catatctctagtataacattttctttatttgattaagtactatttgaccattttgtccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catatctctagtataacattttctttatttgattaagtactatttgaccattttgtccag 320
Query: 121 gatattattttatatttcatgtataagaataaatattacattcaatatttatgacaagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatattattttatatttcatgtataagaataaatattacattcaatatttatgacaagct 380
Query: 181 agtatggaagcatatacacgatagaaagttctaactgcttattattttttaatttaaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtatggaagcatatacacgatagaaagttctaactgcttattattttttaatttaaaaa 440
Query: 241 cattttttgcatacaatattttaattattttatcctcctccagttctttccaggtccttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cattttttgcatacaatattttaattattttatcctcctccagttctttccaggtccttc 500
Query: 301 ctatatttattaattttaaactacagaaagaattgttactgattttaattttccctagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctatatttattaattttaaactacagaaagaattgttactgattttaattttccctagag 560
Query: 361 tgataatattatgaaatactcattttggctttaattttatgtatttatcccaagatggtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgataatattatgaaatactcattttggctttaattttatgtatttatcccaagatggtt 620
Query: 421 ggaaaatcaaagaacaacaaaaaagggaaatataatgaatagcatcctgaagtttcatgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggaaaatcaaagaacaacaaaaaagggaaatataatgaatagcatcctgaagtttcatgc 680
Query: 481 atattaaggagcttagcaaaataacttttataatgattattaaatgtttttcaatgcatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atattaaggagcttagcaaaataacttttataatgattattaaatgtttttcaatgcatg 740
Query: 541 cttaaatatttaaattgataagaagtaaatttttaagacaatcttcaggttt 592
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cttaaatatttaaattgataagaagtaaatttttaagacaatcttcaggttt 792
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
