Query= MSMg01no057_k24.b1 MSMg01no057_k24.b1 CHROMAT_FILE:
MSMg01no057_k24.b1 PHD_FILE: MSMg01no057_k24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:43 2005
(615 letters)
>mm_chr12_37677218_37678234
Length = 1017
Score = 1131 bits (585), Expect = 0.0
Identities = 608/616 (98%), Gaps = 2/616 (0%)
Strand = Plus / Plus
Query: 1 atcagcctccatgtagaagcaattatcttgtcttcctaaaaagaa-atattgaagaggat 59
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 atcagcctccatgtagaagcaattatcttgtcttcctaaaaagaagatattgaagaggat 260
Query: 60 tcaaaaataagtttctcctgaaaacaatatttttaggttctttgtttcatattttctgtt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaaaaataagtttctcctgaaaacaatatttttaggttctttgtttcatattttctgtt 320
Query: 120 cctttattcagtaagactcttgaatgaaacaaaaaagttcaaagtgttaccttctagttc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctttattcagtaagactcttgaatgaaacaaaaaagttcaaagtgttaccttctagttc 380
Query: 180 atatggtgctatctaaatcaaacacatgtcaaaatttcccactcaatgaatgacaaataa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atatggtgctatctaaatcaaacacatgtcaaaatttcccactcaatgaatgacaaataa 440
Query: 240 gtcaatataatataagcaataacaaacatgaaaccatgagagaatgtgttatgtaagatg 299
|||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 gtcaatataatataagcaatcacaaacatgaaaacatgagagaatgtgttatgtaagatg 500
Query: 300 attttagatagctcaacagaagtcttgccttgataataaaattatgaacaaaaa-gtgac 358
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 501 attttagatagctcaacagaagtcttgccttgataataaaattatgaacaaaaaagtgac 560
Query: 359 tcgtgttcttgccagtatcccatgccaattgcatagtatgaggaatatacacagggatag 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcgtgttcttgccagtatcccatgccaattgcatagtatgaggaatatacacagggatag 620
Query: 419 tgaagggtagcattgtgggaaaaaatcaacagcaaaagcaaataatgtatggacatttgt 478
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 621 tgaagggtagcattgtgggaaaaaatcaacagcaaaagaaaataatgtatggatatttgt 680
Query: 479 tttctggaactgaaaacacaatttcaaagccatattatagatttatttattatatattgc 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tttctggaactgaaaacacaatttcaaagccatattatagatttatttattatatattgc 740
Query: 539 aatgtttttattttatcccacaggcattttaacttctagaanataatggagttacatttt 598
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 741 aatgtttttattttatcccacaggcattttaacttctagaaaacaatggagttacatttt 800
Query: 599 taatgttacaaaattg 614
||||||||||||||||
Sbjct: 801 taatgttacaaaattg 816
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1017
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1007
Effective search space: 609235
Effective search space used: 609235
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no057_k24.g1 MSMg01no057_k24.g1 CHROMAT_FILE:
MSMg01no057_k24.g1 PHD_FILE: MSMg01no057_k24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:43 2005
(236 letters)
>mm_chr12_37786924_37787560
Length = 637
Score = 420 bits (217), Expect = e-122
Identities = 230/235 (97%), Gaps = 1/235 (0%)
Strand = Plus / Minus
Query: 1 cttttattganaanatttcaaggaagggttttatccaaatgaacagacttg-aaaaataa 59
|||||||||| || ||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 435 cttttattgataatatttcaaggaagggttttatctaaatgaacagacttgaaaaaataa 376
Query: 60 aacaggctgtgtaaaagaaaaagaacactaaagaaaaattgaatctaaatagaagtcaat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aacaggctgtgtaaaagaaaaagaacactaaagaaaaattgaatctaaatagaagtcaat 316
Query: 120 ctcatagaaggttaaatgagtcactatgtcattcagtgtcttattcctttttataatttc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ctcatagaaggttaaatgagtcactatgtcattcagtgtcttattcctttttataatttc 256
Query: 180 acattggaaaaagtattaaatgaagaagtagattttatatattttaaaaagagtg 234
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 255 acattggaaaaagtattaaatgaagaagtatattttatatattttaaaaagagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 637
Length adjustment: 9
Effective length of query: 227
Effective length of database: 628
Effective search space: 142556
Effective search space used: 142556
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
