Query= MSMg01no057_l20.b1 MSMg01no057_l20.b1 CHROMAT_FILE:
MSMg01no057_l20.b1 PHD_FILE: MSMg01no057_l20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:47 2005
(645 letters)
>mm_chr12_79709940_79710985
Length = 1046
Score = 1220 bits (631), Expect = 0.0
Identities = 639/642 (99%), Gaps = 1/642 (0%)
Strand = Plus / Minus
Query: 5 gaattcaaggtttcatgcccgtgtttcatcaaatcctttactgatatttaagtttgaatg 64
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 gaattcaaggtttcatgcctgtgtttcatcaaatcctttactgatatttaagtttgaatg 787
Query: 65 aagagaacagacttttacatttaacctgactgctaggaatctgctcatttttcctgggat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 aagagaacagacttttacatttaacctgactgctaggaatctgctcatttttcctgggat 727
Query: 125 ctatagatgtttccaactagaaaacatgcagaagacttccagatcaaggctctctgcttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 ctatagatgtttccaactagaaaacatgcagaagacttccagatcaaggctctctgcttt 667
Query: 185 ctggtatgtgaaagggcaaaagcataagctacagtaacagtatcttttggtttcgtcatg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 ctggtatgtgaaagggcaaaagcataagctacagtaacagtatcttttggtttcgtcatg 607
Query: 245 ccagagaactcagggccttgtacatgctaggtagtttctctgagccacattcatagacaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ccagagaactcagggccttgtacatgctaggtagtttctctgagccacattcatagacaa 547
Query: 305 gtaatggagtttttactttgacctctgtgtgtatatttatactaaggaattttcatagga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gtaatggagtttttactttgacctctgtgtgtatatttatactaaggaattttcatagga 487
Query: 365 ctatataatacttttcctgcagaataataagattgtatcaaaaatacataggtacagatt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 ctatataatacttttcctgcagaataataagattgtatcaaaaatacataggtacagatt 427
Query: 425 agcaggtttatcagtgaatgaagtaattttgacagttaattgagaatggatataacagta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 agcaggtttatcagtgaatgaagtaattttgacagttaattgagaatggatataacagta 367
Query: 485 ttcaggaatatggatagag-aaaaaatgtagaaaaatagagtacgtgtctgatgaccctt 543
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ttcaggaatatggatagagaaaaaaatgtagaaaaatagagtacgtgtctgatgaccctt 307
Query: 544 tanaaaaaacaacgtatttacctcgaacagcatagccatcttttactgatgcagggaatg 603
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 taaaaaaaacaacgtatttacctcgaacagcatagccatcttttactgatgcagggaatg 247
Query: 604 ggggtaggttgtcttttgcatatacatcttgagcaaggactc 645
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ggggtaggttgtcttttgcatatacatcttgagcaaggactc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1046
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1036
Effective search space: 657860
Effective search space used: 657860
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no057_l20.g1 MSMg01no057_l20.g1 CHROMAT_FILE:
MSMg01no057_l20.g1 PHD_FILE: MSMg01no057_l20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:47 2005
(618 letters)
>mm_chr12_79604824_79605841
Length = 1018
Score = 1172 bits (606), Expect = 0.0
Identities = 615/618 (99%)
Strand = Plus / Plus
Query: 1 taggaaatctattgtcatacatagaaagaacgttatacacatgagcagaaccatggtctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taggaaatctattgtcatacatagaaagaacgttatacacatgagcagaaccatggtctg 260
Query: 61 tagttgagaggcacatctaaactctgaactgctagagatgaaagcaagaaaaaataagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagttgagaggcacatctaaactctgaactgctagagatgaaagcaagaaaaaataagtg 320
Query: 121 caaaacctattctcttctaatccatggtctatgccaggccttgatatctggaacccaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaaacctattctcttctaatccatggtctatgccaggccttgatatctggaacccaact 380
Query: 181 ggacatccaagagtacaaataattagttgatgatgtccataaaggtcagctagaagcgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggacatccaagagtacaaataattagttgatgatgtccataaaggtcagctagaagcgaa 440
Query: 241 gagaataaaatgttggaaaatgagataatatctaggaatttcttgctcaagaaatcaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 441 gagaataaaatgttggaaaatgagataatatctaggaatttcttgctcaagaaatcagac 500
Query: 301 tattaaatggcaaagctagttattgtgtgacatgcatgtcctcctaaacacgcttgaggt 360
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 501 tattaaatggcaaagctagttattgtgtggcatgcatgtcctcctaaccacgcttgaggt 560
Query: 361 ctacttctcactaaattattttacattttatttgccagaaaagaatataaatgtaaaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctacttctcactaaattattttacattttatttgccagaaaagaatataaatgtaaaaat 620
Query: 421 gtgtaaatcaaatattatatctgcttgtagataataagtgaaaccaattgaatgagagct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtgtaaatcaaatattatatctgcttgtagataataagtgaaaccaattgaatgagagct 680
Query: 481 caacaacaaagaatgaacaaaaaaatcaaaaacaaaaaagatgtgaatgctgattattat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caacaacaaagaatgaacaaaaaaatcaaaaacaaaaaagatgtgaatgctgattattat 740
Query: 541 tggccttttgtagtgttaaacaacagtcattcttgtttagattccagactccatcatttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tggccttttgtagtgttaaacaacagtcattcttgtttagattccagactccatcatttc 800
Query: 601 tcgtggtgttcaggtgct 618
||||||||||||||||||
Sbjct: 801 tcgtggtgttcaggtgct 818
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space: 612864
Effective search space used: 612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
