Query= MSMg01no059_i08.b1 MSMg01no059_i08.b1 CHROMAT_FILE:
MSMg01no059_i08.b1 PHD_FILE: MSMg01no059_i08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:03 2005
(539 letters)
>mm_chr12_91227236_91228174
Length = 939
Score = 625 bits (323), Expect = 0.0
Identities = 350/359 (97%)
Strand = Plus / Plus
Query: 1 acatacgtagaagcagagctggctttctataccttgtactcacgtctccctaatgtgtga 60
|||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |
Sbjct: 201 acatacgtagaagcagagctggctttctataccttgcactcatgtctccctaatgtgtaa 260
Query: 61 tatccttttgtcctgattaatagttatgaacatatatatttggtcatttctgccctatca 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 tatccttttgtcttgattaatagttatgaacatatatatttggtcatttctgccctaaca 320
Query: 121 ccattatttttatttcttgcttggctgtttctcatggatgctactacagaaaagccagag 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 ccattatttttatttcttgcttggctgtttctcatggatgctactacagaaaagacagag 380
Query: 181 gacacagcacctaaatttattacctccatcatgttgtagttgccctccataattagtggg 240
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 gacacagcacctaaatttattacctccatcatgttgtaattgccctccataattagtggc 440
Query: 241 aatatagatatcatcttcataacctcattggattgtgtaaatgataaatgagaggtaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatatagatatcatcttcataacctcattggattgtgtaaatgataaatgagaggtaaat 500
Query: 301 acacctatgtctctgcttacaaaatgagtgtaattgcttttctttttaaaaatactttt 359
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 501 acacctatgtctctgcttacaaaatgagtataattgcttttctttttaaaaatactttt 559
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 939
Length adjustment: 10
Effective length of query: 529
Effective length of database: 929
Effective search space: 491441
Effective search space used: 491441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no059_i08.g1 MSMg01no059_i08.g1 CHROMAT_FILE:
MSMg01no059_i08.g1 PHD_FILE: MSMg01no059_i08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:03 2005
(633 letters)
>mm_chr12_91373675_91374700
Length = 1026
Score = 1143 bits (591), Expect = 0.0
Identities = 620/633 (97%), Gaps = 7/633 (1%)
Strand = Plus / Minus
Query: 1 tacctatctccgaacatggaatgtgaaagtacaaattaaacaacaacaacaacaaacatg 60
|||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 826 tacccatctccgaacatggaatgtgaaagtacaaattaaacaacaacaaca------atg 773
Query: 61 attaaagtcttgtacttggagctggatggatgactcaattaattagtaaagtatttatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 attaaagtcttgtacttggagctggatggatgactcaattaattagtaaagtatttatcc 713
Query: 121 acaaatatgaagactcaagatcagacaccaagaactcatacaaaacccagataagataac 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 acaaatatgaagacccaagatcagacaccaagaactcatacaaaacccagataagataac 653
Query: 181 atatatcattaatcccaatgttcccacaataaactgtgacacagagaaagacaaattcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 atatatcattaatcccaatgttcccacaataaactgtgacacagagaaagacaaattcct 593
Query: 241 taacaggtagttaacacagcacacaagagatcctatattaaacaaggtagaagacaaaga 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tagcaggtagttaacacagcacacaagagatcctatattaaacaaggtagaagacaaaga 533
Query: 301 ccaatatctgaaattgtcctctgatctttatatgaactccttggtagacacatgtttgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 ccaatatctgaaattgtcctctgatctttatatgaactccttggtagacacatgtttgca 473
Query: 361 tacacatgtacacatgcacacatgcactttaaaaatatgtatttttttctatcaaccatc 420
||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 472 tacgcatgtacacatgcacacatgcacttttaaaatatgtatttttttctatcaaccatc 413
Query: 421 cttatcacactggcacttctgtagtctagacccaggtttagtaactaatatgctgatgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 cttatcacactggcacttctgtagtctagacccaggtttagtaactaatatgctgatgct 353
Query: 481 cttggaaatttattatacatagcgtttaaccatgttgcatttcttcaggtagatcttact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 cttggaaatttattatacatagcgtttaaccatgttgcatttcttcaggtagatcttact 293
Query: 541 cttaagccaatactgccaattatttgcatttgttctgaagcaaattttttgactatttta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 292 cttaagccaatactgccaattatttgcatttgttctgaagcaaattttttgacta-ttta 234
Query: 601 tacttctttgctcttgttcatataagatgatga 633
|||||||||| ||||||||||||||||||||||
Sbjct: 233 tacttctttgttcttgttcatataagatgatga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1026
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1016
Effective search space: 632968
Effective search space used: 632968
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
