Query= MSMg01no061_n13.b1 MSMg01no061_n13.b1 CHROMAT_FILE:
MSMg01no061_n13.b1 PHD_FILE: MSMg01no061_n13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:56 2005
(571 letters)
>mm_chr12_79710014_79710985
Length = 972
Score = 1085 bits (561), Expect = 0.0
Identities = 567/569 (99%), Gaps = 1/569 (0%)
Strand = Plus / Minus
Query: 4 gaattcaaggtttcatgcctgtgtttcatcaaatcctttactgatatttaagtttgaatg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 gaattcaaggtttcatgcctgtgtttcatcaaatcctttactgatatttaagtttgaatg 713
Query: 64 aagagaacagacttttacatttaacctgactgctaggaatctgctcatttttcctgggat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 aagagaacagacttttacatttaacctgactgctaggaatctgctcatttttcctgggat 653
Query: 124 ctatagatgtttccaactagaaaacatgcagaagacttccagatcaaggctctctgcttt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 ctatagatgtttccaactagaaaacatgcagaagacttccagatcaaggctctctgcttt 593
Query: 184 ctggtatgtgaaagggcaaaagcataagctacagtaacagtatcttttggtttcgtcatg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 ctggtatgtgaaagggcaaaagcataagctacagtaacagtatcttttggtttcgtcatg 533
Query: 244 ccagagaactcagggccttgtacatgctaggtagtttctctgagccacattcatagacaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 ccagagaactcagggccttgtacatgctaggtagtttctctgagccacattcatagacaa 473
Query: 304 gtaatggagtttttactttgacctctgtgtgtatatttatactaaggaattttcatagga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gtaatggagtttttactttgacctctgtgtgtatatttatactaaggaattttcatagga 413
Query: 364 ctatataatacttttcctgcagaataataagattgtatcaaaaatacataggtacagatt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ctatataatacttttcctgcagaataataagattgtatcaaaaatacataggtacagatt 353
Query: 424 agcaggtttatcagtgaatgaagtaattttgacagttaattgagaatggatataacagta 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 agcaggtttatcagtgaatgaagtaattttgacagttaattgagaatggatataacagta 293
Query: 484 ttcacgaatatggatagagaaaaaa-tgtagaaaaatagagtacgtgtctgatgaccctt 542
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 292 ttcaggaatatggatagagaaaaaaatgtagaaaaatagagtacgtgtctgatgaccctt 233
Query: 543 taaaaaaaacaacgtatttacctcgaaca 571
|||||||||||||||||||||||||||||
Sbjct: 232 taaaaaaaacaacgtatttacctcgaaca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 972
Length adjustment: 10
Effective length of query: 561
Effective length of database: 962
Effective search space: 539682
Effective search space used: 539682
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no061_n13.g1 MSMg01no061_n13.g1 CHROMAT_FILE:
MSMg01no061_n13.g1 PHD_FILE: MSMg01no061_n13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:56 2005
(394 letters)
>mm_chr12_79604824_79605617
Length = 794
Score = 739 bits (382), Expect = 0.0
Identities = 391/394 (99%)
Strand = Plus / Plus
Query: 1 taggaaatctattgtcatacatagaaagaacgttatacacatgagcagaaccatggtctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taggaaatctattgtcatacatagaaagaacgttatacacatgagcagaaccatggtctg 260
Query: 61 tagttgagaggcacatctaaactctgaactgctagagatgaaagcaagaaaaaataagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagttgagaggcacatctaaactctgaactgctagagatgaaagcaagaaaaaataagtg 320
Query: 121 caaaacctattctcttctaatccatggtctatgccaggccttgatatctggaacccaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaaacctattctcttctaatccatggtctatgccaggccttgatatctggaacccaact 380
Query: 181 ggacatccaagagtacaaataattagttgatgatgtccataaaggtcagctagaagcgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggacatccaagagtacaaataattagttgatgatgtccataaaggtcagctagaagcgaa 440
Query: 241 gagaataaaatgttggaaaatgagataatatctaggaatttcttgctcaagaaatcaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 441 gagaataaaatgttggaaaatgagataatatctaggaatttcttgctcaagaaatcagac 500
Query: 301 tattaaatggcaaagctagttattgtgtgacatgcatgtcctcctaaacacgcttgaggt 360
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 501 tattaaatggcaaagctagttattgtgtggcatgcatgtcctcctaaccacgcttgaggt 560
Query: 361 ctacttctcactaaattattttacattttatttg 394
||||||||||||||||||||||||||||||||||
Sbjct: 561 ctacttctcactaaattattttacattttatttg 594
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 794
Length adjustment: 9
Effective length of query: 385
Effective length of database: 785
Effective search space: 302225
Effective search space used: 302225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
