CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTTGAGATCTCGCTAAGAAAAAGATAAAACATCAAAGGTCTTAAGTGAA
TGAAATAGGACTGATGGTGGAAGCAACCGAGAGCTAGTTTGTGACAATAA
AATAAGACTTTACAAACACGACCAAAGACAGAAAAGAAAGCACATCTTTG
ATCTACAAATTGTACCATTGCTGGAAATTTTAGTGAAGTAGAGCCAAATT
GTGGCTCAAGATTGTTTATTTTATTTTATTTTATTGTATTGTATTGTATT
ATTTTGAAGCAAAGCAAAGCAAACTGGAAGTCATCCTAGGATAATATATC
ATATAGTCAGACTAAAGAGCACTGAGCTGGTTGGGCTACAGAGTATTTGG
ATGTATGACTGGGTTATATGAATATTGATGTTCTGTCCTAGGTAAGTCTA
CGCAGATCTATAGTTGACTCTGAACTGAAGGCTAGCAGCATTTGTTGGCG
GTGCCTGCTTTTTTTCTCCGTGGTTTTATGGAACAGCTGGCGTCTGGATG
ATTAGTTTATTTTTTTGTGGGCTACAGAATACTTGGCCTTCCCGTTGCTT
ATGAAATATGACTCACTTATGGTATCTAATCAGATGGCTAGAAGCCTGAC
ATAGCTTGCTGTGTAGCTACTCATCAGTGCTGAGCTGTT

CGATATAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAGATGCCCCTCAACAGAGGAATGGAT
ACAGAAAATGTGGTACATTTACACAATGGAGTACTACTCAGCAATTAAAA
ACAATGAATTTATGAAATTCCTAGGCAAATTAATGGACCTGGAGGGCATC
ATTCTGAGTGAGGTAATCCAATCACAAAAGAACTCACATGAAATGTACTC
ATTGATAAGTGGGTATTAGCCCAGAAACTTAGAATACCCAAGATACAAGA
TACAATTTGCAAAATACATGAAACACAAGAACGAAGACAAAAGTGTGCAC
ACTTTGCTCCTTCTTAGAATTGGGAACAAAACACCCATGGAAGGAGTTAC
AGAGACAAAGTTTGGAGCTGAGATGAAAGGATGGACCATCTAGAGACTGC
CATACCCAGGGATCCTTCCCATAATCATCCTCCAAACGCTGACATCATTG
CATACACTATCAAGGTTTTGCTGAAAGGACCCTGATATAGCTGTCTCTTG
AGAGGCTATGCTGGAGCCTAGCAAACACAGAAGTGGATGCTCACAGTCAG
CTATTGGATGGATCACAGGACCCCCAATGGAGGAGCTAGAGAAAGTACCC
AAGGAGCTAAAGGGGTCTGCAACCCTATAGGTGGGACAACAA

Query= MSMg01no063_a16.b1 MSMg01no063_a16.b1 CHROMAT_FILE:
MSMg01no063_a16.b1 PHD_FILE: MSMg01no063_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:14 2005
         (585 letters)



>mm_chr12_65550647_65551631
          Length = 985

 Score =  872 bits (451), Expect = 0.0
 Identities = 491/527 (93%), Gaps = 35/527 (6%)
 Strand = Plus / Minus

                                                                       
Query: 94  agtttgtgacaataaaataagactttacaaacacgaccaaagacagaaaagaaagcacat 153
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 985 agtttgtgacaataaaataagactttacaaacacgaccaaagacagaaaagaaagcacat 926

                                                                       
Query: 154 ctttgatctacaaattgtaccattgctggaaattttagtgaagtagagccaaattgtggc 213
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 ctttgatctacaaattgtaccattgctggaaattttagtgaagtagagccaaattgtggc 866

                                                                       
Query: 214 tcaagattgtttattttattttattt---------------------------------- 239
           ||||||||||||||||||||||||||                                  
Sbjct: 865 tcaagattgtttattttattttattttattttattttattttattgtattgtattgtatt 806

                                                                       
Query: 240 -tattgtattgtattgtattattttgaagcaaagcaaagcaaactggaagtcatcctagg 298
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gtattgtattgtattgtattattttgaagcaaagcaaagcaaactggaagtcatcctagg 746

                                                                       
Query: 299 ataatatatcatatagtcagactaaagagcactgagctggttgggctacagagtatttgg 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ataatatatcatatagtcagactaaagagcactgagctggttgggctacagagtatttgg 686

                                                                       
Query: 359 atgtatgactgggttatatgaatattgatgttctgtcctaggtaagtctacgcagatcta 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atgtatgactgggttatatgaatattgatgttctgtcctaggtaagtctacgcagatcta 626

                                                                       
Query: 419 tagttgactctgaactgaaggctagcagcatttgttggcggtgcctgctttttttctccg 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tagttgactctgaactgaaggctagcagcatttgttggcggtgcctgctttttttctccg 566

                                                                       
Query: 479 tggttttatggaacagctggcgtctggatgattagtttatttttttgtgggctacagaat 538
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 565 tggttttatggaacagctggcgtctggatgattagtttatttttctgtgggctacagaat 506

                                                          
Query: 539 acttggccttcccgttgcttatgaaatatgactcacttatggtatct 585
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acttggccttcccgttgcttatgaaatatgactcacttatggtatct 459


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space:   560625
Effective search space used:   560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)