Query= MSMg01no065_b08.b1 MSMg01no065_b08.b1 CHROMAT_FILE:
MSMg01no065_b08.b1 PHD_FILE: MSMg01no065_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:29 2005
(244 letters)
>mm_chr12_30789802_30790448
Length = 647
Score = 462 bits (239), Expect = e-135
Identities = 244/247 (98%), Gaps = 3/247 (1%)
Strand = Plus / Minus
Query: 1 agaggcatact---ggggggggggcatgaatgcattcatttcctacttgtcctttggtcc 57
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 agaggcatactgggggggggggggcatgaatgcattcatttcctacttgtcctttggtcc 388
Query: 58 aacatttgccattgggtccattgatctacagcatcaaaacatggtccatcttgaccctag 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aacatttgccattgggtccattgatctacagcatcaaaacatggtccatcttgaccctag 328
Query: 118 tttgactcttcacatcagtggataactcggtgtttgtttatatgccacattccacaacag 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tttgactcttcacatcagtggataactcggtgtttgtttatatgccacattccacaacag 268
Query: 178 aatgttcaaagtgtatgataaatatagcaggtactcagctcaacatagataagaccagtt 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aatgttcaaagtgtatgataaatatagcaggtactcagctcaacatagataagaccagtt 208
Query: 238 accagaa 244
|||||||
Sbjct: 207 accagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 647
Length adjustment: 9
Effective length of query: 235
Effective length of database: 638
Effective search space: 149930
Effective search space used: 149930
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no065_b08.g1 MSMg01no065_b08.g1 CHROMAT_FILE:
MSMg01no065_b08.g1 PHD_FILE: MSMg01no065_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:29 2005
(475 letters)
>mm_chr12_30633631_30634505
Length = 875
Score = 919 bits (475), Expect = 0.0
Identities = 475/475 (100%)
Strand = Plus / Plus
Query: 1 tttggacagctgtctttattccgaattctgataggtcctgttctatggctgtttctgggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttggacagctgtctttattccgaattctgataggtcctgttctatggctgtttctgggc 260
Query: 61 aggtcagaggtgagaacctacatttaaaaagcctgatcttgtgtcctctggtcccaggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggtcagaggtgagaacctacatttaaaaagcctgatcttgtgtcctctggtcccaggct 320
Query: 121 ctgttgatgactggttctcagggttcctggtaggtatgtccaagataatgaataaggagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgttgatgactggttctcagggttcctggtaggtatgtccaagataatgaataaggagg 380
Query: 181 acacaggataaaatacagggggaagttcctgcagtctcctgtcacagcctcatcgccagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acacaggataaaatacagggggaagttcctgcagtctcctgtcacagcctcatcgccagg 440
Query: 241 atctacagataacagtagtttgcatatgttacagtgtgaaagtacgtcctgtatgcattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atctacagataacagtagtttgcatatgttacagtgtgaaagtacgtcctgtatgcattt 500
Query: 301 catctattaaccatgtactggtggctacgagccctgcaacacattcctgaatggaaccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catctattaaccatgtactggtggctacgagccctgcaacacattcctgaatggaaccaa 560
Query: 361 caggactccatctgatgcgctgtcttgtctgcaaggcccatcacagctgcctgttttgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caggactccatctgatgcgctgtcttgtctgcaaggcccatcacagctgcctgttttgag 620
Query: 421 accggggcacataccaacatcctgctcagttgggaatgttttaacagcaaaatca 475
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 accggggcacataccaacatcctgctcagttgggaatgttttaacagcaaaatca 675
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
