Query= MSMg01no070_b07.b1 MSMg01no070_b07.b1 CHROMAT_FILE:
MSMg01no070_b07.b1 PHD_FILE: MSMg01no070_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:01 2005
(153 letters)
>mm_chr12_107139963_107140514
Length = 552
Score = 288 bits (149), Expect = 9e-83
Identities = 152/153 (99%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 1 gtgatttttaccagtaaatttttatttgaatattttatatattacctatgcaaaaataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtgatttttaccagtaaatttttatttgaatattttatatattacctatgcaaaaataaa 260
Query: 61 tttcttgtgttaaaaaaaatagtcacagctgtgaaaaagtacaagaaactctagcttaaa 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 tttcttgtgttaaaaaaaatagtcacagctg-gaaaaagtacaagaaactctagcttaaa 319
Query: 121 tcttcaccagtttccttcgccaagacatgtcgt 153
|||||||||||||||||||||||||||||||||
Sbjct: 320 tcttcaccagtttccttcgccaagacatgtcgt 352
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 153
Length of database: 552
Length adjustment: 8
Effective length of query: 145
Effective length of database: 544
Effective search space: 78880
Effective search space used: 78880
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no070_b07.g1 MSMg01no070_b07.g1 CHROMAT_FILE:
MSMg01no070_b07.g1 PHD_FILE: MSMg01no070_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:01 2005
(208 letters)
>mm_chr12_107301607_107302215
Length = 609
Score = 366 bits (189), Expect = e-106
Identities = 204/209 (97%), Gaps = 1/209 (0%)
Strand = Plus / Minus
Query: 1 agagaaaggacacagcaataataaaaaataagaacagaaatgtaagactcaggaactcta 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 409 agagaaaggacacagcaataataaaaaataagaagagaaatgtaagactcaggaactcta 350
Query: 61 accactaagaacacagagcacagag-aacaccaggacacctgccctcttaacaacttgag 119
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 349 accactaagaacacagagcacagagaaacaccaggacacctgccctcttaacaacttgag 290
Query: 120 agatgggctatggacgaagacatccctcttgtgagagaatgcatatggagactaattaac 179
||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 289 agatgggctatggacaaagacatccctcttgtgagagaatgcatatggagtctaattaac 230
Query: 180 tcaaagtgttcacacacaaaagataaaat 208
|| ||||||||||||||||||||||||||
Sbjct: 229 tctaagtgttcacacacaaaagataaaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 208
Length of database: 609
Length adjustment: 9
Effective length of query: 199
Effective length of database: 600
Effective search space: 119400
Effective search space used: 119400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
