Query= MSMg01no070_p12.b1 MSMg01no070_p12.b1 CHROMAT_FILE:
MSMg01no070_p12.b1 PHD_FILE: MSMg01no070_p12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:18:13 2005
(632 letters)
>mm_chr12_94571860_94572890
Length = 1031
Score = 1185 bits (613), Expect = 0.0
Identities = 625/629 (99%), Gaps = 1/629 (0%)
Strand = Plus / Minus
Query: 4 gaattcatcactatctccccagggtttatgccaggttaatatctggaatgatttcaattc 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 gaattcatcactatctacccagggtttatgccaggttaatatctggaatgatttcaattc 772
Query: 64 caataaatgtagtgaaaacatttattacccttatgagaagaaacttgagaggaatcattt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 caataaatgtagtgaaaacatttattacccttatgagaagaaacttgagaggaatcattt 712
Query: 124 tgtgatggtacaggaaagaaaataaacataaaacagttatatctattttcaaatagacac 183
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 711 tgtgat-gtacaggaaagaaagtaaacataaaacagttatatctattttcaaatagacac 653
Query: 184 agcactgctaacagacacttcatcttcttgacctccaatcttagacttcttggcttctag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 agcactgctaacagacacttcatcttcttgacctccaatcttagacttcttggcttctag 593
Query: 244 aaataggattaagttatttcagccctgtggtttacagtgttgtgtttaagtagccccaac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 aaataggattaagttatttcagccctgtggtttacagtgttgtgtttaagtagccccaac 533
Query: 304 agattcagtcccgtggttgtgattatacaattgtaaataattgattgatttccaaatact 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 agattcagtcccgtggttgtgattatacaattgtaaataattgattgatttccaaatact 473
Query: 364 aagtcattatttacaatgagagcaacccaccattctctagaatgaatctttataaaactg 423
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 472 aagtcattatttacaatgagagcaacccaccactctctagaatgaatctttataaaactg 413
Query: 424 aatttccggtttctgtgaatatttaatctcatgtataagatcctctagtatgcaatggta 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 aatttccggtttctgtgaatatttaatctcatgtataagatcctctagtatgcaatggta 353
Query: 484 attttcaatttttagtttgccaaaacagttactaaattacttattaatttactagattac 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 attttcaatttttagtttgccaaaacagttactaaattacttattaatttactagattac 293
Query: 544 ttataaagtgtgcatgtggcactacttagaaaagcatagttgatgaaaaggtgggtaaat 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ttataaagtgtgcatgtggcactacttagaaaagcatagttgatgaaaaggtgggtaaat 233
Query: 604 tgctgaaattgttcctctctactcacaac 632
|||||||||||||||||||||||||||||
Sbjct: 232 tgctgaaattgttcctctctactcacaac 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1031
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1021
Effective search space: 635062
Effective search space used: 635062
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no070_p12.g1 MSMg01no070_p12.g1 CHROMAT_FILE:
MSMg01no070_p12.g1 PHD_FILE: MSMg01no070_p12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:18:13 2005
(534 letters)
>mm_chr12_94405953_94406886
Length = 934
Score = 845 bits (437), Expect = 0.0
Identities = 461/471 (97%), Gaps = 4/471 (0%)
Strand = Plus / Plus
Query: 68 caaagtctttattctgttcctgattattaatgtgatgtgaccagttctctcaggttatta 127
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 264 caaagtctttattctgttcctgataattaatgtgatgtgaccagttctctcaggttatta 323
Query: 128 ccacaggaacttgcttgccataatagactggaacttggaactattagctaaaatcactcc 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccacaggaacttgcttgccataatagactggaacttggaactattagctaaaatcactcc 383
Query: 188 tctcttacatctcctaatctttgttcatattgtgtcacagaaattaaaaatgaaattgag 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tctcttacatctcctaatctttgttcatattgtgtcacagaaattaaaaatgaaattgag 443
Query: 248 acactttc----ccaaagtttctatagcatctcaaaacaacatcatcaactgaggtccat 303
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 acactttctttcccaaagtttctatagcatctcaaaacaacatcatcaactgaggtccat 503
Query: 304 gtatttaaacacaggagctggcttggtaaattcccatgcaagccacagcacaatgggagc 363
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtatttaaacacaggagctggctgggtaaattcccatgcaagccacagcacaatgggagc 563
Query: 364 cagttaataaaaactcaaaaagaaataaaaataaaattcacttactaagccattttttcc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cagttaataaaaactcaaaaagaaataaaaataaaattcacttactaagccattttttcc 623
Query: 424 tggagtacagatgaatctgataaagtttctaatataattttctacctaaaaagttatcaa 483
| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 624 tcgagtacagatgaatatgataaagtttctaatattattttctacctaaaaagttatcaa 683
Query: 484 gaagctagtatgagaaagtactccatgttgacctctgaaaatgagtcttta 534
|||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 684 gaagctagtatgagaaagtactccatgttgacatctgaaaatgagtcttta 734
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space: 484176
Effective search space used: 484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
