Query= MSMg01no072_b20.b1 MSMg01no072_b20.b1 CHROMAT_FILE:
MSMg01no072_b20.b1 PHD_FILE: MSMg01no072_b20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:44 2005
(513 letters)
>mm_chr12_8253033_8253945
Length = 913
Score = 909 bits (470), Expect = 0.0
Identities = 500/510 (98%)
Strand = Plus / Plus
Query: 4 gaattcctcacctgctgcctcctgagacagagctctacttagggctgaaaacaagctcac 63
||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 204 gaattcctcacctgcagggtcctgagacagagctctacttagggctgagaacaagctcac 263
Query: 64 agctggttgataaggtaatgaggtgggcagcatcaccttgctggaattaacacctggggg 123
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 264 agctggttgataaggtaatgaggtgggcagcgtcaccttgctggaattaacacctggggg 323
Query: 124 gttgtcatggagagtgcagggtgaagtaagagacagaagctgcagaatgttgagtggtag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gttgtcatggagagtgcagggtgaagtaagagacagaagctgcagaatgttgagtggtag 383
Query: 184 ataataatctagaagctgaccggtgggaaggaacattcaatataggaagagaagaatgat 243
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ataatagtctagaagctgaccggtgggaaggaacattcaatataggaagagaagaatgat 443
Query: 244 tgagggagcatatttttcttttcccccatttttatctttatgtgtatgggtgttttgcct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgagggagcatatttttcttttcccccatttttatctttatgtgtatgggtgttttgcct 503
Query: 304 gcatgtatatttgcatatcacatgcatgcagagccagaggagaccagaagagggtgttgg 363
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gcatgcatatttgcatatcacatgcatgcagagccagaggagaccagaagagggtgttgg 563
Query: 364 atccccccgagactggatcacagtccactgagttgtcacacgcgctgggaatcagatccc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 atccccccgagactggatcacagtccactgagttgtcacacgcgctgggaatcagatccc 623
Query: 424 agtcctctgtgagagcagcagatgacactcttaacctctggtcatcgctccagctcctct 483
|| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 624 agccctctgcgagagcagcagatgacactcttaacctctggccatcgctccagctcctct 683
Query: 484 gacttaagtgcacttttgtttcttcaagta 513
||||||||||||||||||||||||||||||
Sbjct: 684 gacttaagtgcacttttgtttcttcaagta 713
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space: 454209
Effective search space used: 454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no072_b20.g1 MSMg01no072_b20.g1 CHROMAT_FILE:
MSMg01no072_b20.g1 PHD_FILE: MSMg01no072_b20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:44 2005
(437 letters)
>mm_chr12_8416641_8417477
Length = 837
Score = 785 bits (406), Expect = 0.0
Identities = 430/438 (98%), Gaps = 2/438 (0%)
Strand = Plus / Minus
Query: 1 catgcatgtacgcaacgcactttaatcatatacacccccgcgtccccccaggagtagcta 60
||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 637 catgcatgtacgcaacgtactttaatcatatacacccccgagtccccccaggagtagcta 578
Query: 61 tctctttgatgagagcttcacgctgggctcttgacatgcattgctgtttggtatgggaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 tctctttgatgagagcttcacgctgggctcttgacatgcattgctgtttggtatgggaca 518
Query: 121 ggaggagatgagtggatggtgtggtctctctagttcga-taataaagaaagggctttcag 179
|| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 517 gggggagatgagtggatggtgtggtctctctagttc-actaataaagaaagggctttcag 459
Query: 180 aacttaccggaagcctcaagctagagagaggatgcctcctgttttgtgtgggatcttcaa 239
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 aacttgccggaagcctcaagctagagagaggatgcctcctgttttgtgtgggatcttcaa 399
Query: 240 tcttccagagctgtatgtgtttgttcccagggcagggaccctctgagcattgtcaccagc 299
||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 398 tcttccagagctggatgtgtttgttcccagggcagggaccctctgagcattgttaccagc 339
Query: 300 tctgtctcatcccctactgactgctgaccacaagccctctaatggttttctctctggtgt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tctgtctcatcccctactgactgctgaccacaagccctctaatggttttctctctggtgt 279
Query: 360 agtgggagcagcttcgtggctatgtgcctcctttccttttgaggcatctccccatctgag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 agtgggagcagcttcgtggctatgtgcctcctttccttttgaggcatctccccatctgag 219
Query: 420 catggcacagctctgaga 437
||||||||||||||||||
Sbjct: 218 catggcacagctctgaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
