Query= MSMg01no072_g02.b1 MSMg01no072_g02.b1 CHROMAT_FILE:
MSMg01no072_g02.b1 PHD_FILE: MSMg01no072_g02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:06 2005
(582 letters)
>mm_chr12_94287286_94288267
Length = 982
Score = 1087 bits (562), Expect = 0.0
Identities = 574/578 (99%)
Strand = Plus / Minus
Query: 5 gaattcatctcttgactcctaaaattatagctcataggttgttacacaatatttttctgt 64
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 782 gaattcatctcttgactcctaaaattatagctcacaggttgttacacaatatttttctgt 723
Query: 65 taaattgtacttaggaacactgagtaggaaacaacttccagaaattgtaactaatgacat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 taaattgtacttaggaacactgagtaggaaacaacttccagaaattgtaactaatgacat 663
Query: 125 aaacactgccaggatcatgatcaagattagttcaaactagcttctttgtaacactatgaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 aaacactgccaggatcatgatcaagattagttcaaactagcttctttgtaacactatgaa 603
Query: 185 tctaaatatctttgacttctcaaaaataataatataaataacagccatatgtctgtaaga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tctaaatatctttgacttctcaaaaataataatataaataacagccatatgtctgtaaga 543
Query: 245 ttttgacacaagaatcatctcacttaaaaaattttaaagtagtgccctatgtcataaggt 304
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 542 ttttgacacaagaatcatctcacttaaaaaattttaaagtagtgtcctatgtcataaggt 483
Query: 305 aacacctatatttctgtatttcaagagtcatataatgcctgctagcatcagaacatataa 364
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aacacctatatttctatatttcaagagtcatataatgcctgctagcatcagaacatataa 423
Query: 365 tactaaactaaataaatttagacaaagatataatatatttaagctttcatattatgaata 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tactaaactaaataaatttagacaaagatataatatatttaagctttcatattatgaata 363
Query: 425 aaacatcatctataccaaatagcttatttagtttgtttaagatgtgcaatgtgatttaag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aaacatcatctataccaaatagcttatttagtttgtttaagatgtgcaatgtgatttaag 303
Query: 485 aatacatattgccaagtgagactgcatcatctttttatttgcatgaaattactgtgcaag 544
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 302 aatacatattgccaagtgagactgcatcatctttttatttgcatgaaattattgtgcaag 243
Query: 545 tttattttacatgaattcaactgacttgaatatcatag 582
||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tttattttacatgaattcaactgacttgaatatcatag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space: 555984
Effective search space used: 555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no072_g02.g1 MSMg01no072_g02.g1 CHROMAT_FILE:
MSMg01no072_g02.g1 PHD_FILE: MSMg01no072_g02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:06 2005
(533 letters)
>mm_chr12_94147614_94148545
Length = 932
Score = 969 bits (501), Expect = 0.0
Identities = 525/533 (98%), Gaps = 1/533 (0%)
Strand = Plus / Plus
Query: 1 catttcacggatgtagaaattaaaactagcagggtgttactgcgtctttaatgttatgct 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catttcacagatgtagaaattaaaactagcagggtgttactgcgtctttaatgttatgct 260
Query: 61 gacacaagatagtcttccagttttaattcaccctcttgttttctttttttgacaaataac 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacacaagatattcttccagttttaattcaccctcttgttttctttttttgacaaataac 320
Query: 121 ctgttatatttttatcaaataaagaaattatctttaaaacctcctctagaattgtgtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgttatatttttatcaaataaagaaattatctttaaaacctcctctagaattgtgtttt 380
Query: 181 ttcatgataccccacaattcttctaatgcttgcattctttgcaaaaactaagaaaatgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcatgataccccacaattcttctaatgcttgcattctttgcaaaaactaagaaaatgct 440
Query: 241 tgtcacatggtattcattattacacctttatattgaaatcttattcaacaatatgttaag 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 441 tgtcacatggtattcattattacacctttatattgaaatcttattcaacaatattttgag 500
Query: 301 ctagagattaaaaaacagtgaaagagatttaggtaggttttaggaatattctccacagtc 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 501 ctagagattaaaaaacagtgaaagagatttaggtaggttttaggaatatgctccacagtc 560
Query: 361 aatggccaacagaacaaaatcatacaagaaatatcattgaccgtgtaggtttttacaacc 420
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 561 aatggccaacagaacaaaatcatacaagaaatatcattgactgtgtaggtttttacaacc 620
Query: 421 cccccgccctcccccccttccccaaaaatggtacaatagattcacaggaggagactttac 480
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cccccgccctcccccc-tcccccaaaaatggtacaatagattcacaggaggagactttac 679
Query: 481 gaagaaatgtgtggaatataaatttaacaagatgacacttaggagaaaaagaa 533
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gaagaaatgtgtggaatataaatttaacaagatgacacttaggagaaaaagaa 732
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 932
Length adjustment: 10
Effective length of query: 523
Effective length of database: 922
Effective search space: 482206
Effective search space used: 482206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
