ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CCTAAAACTAATTGTTTTTATCCTTGAAGTGATTGGGATGCTACAAAACA
AGGAAATGCCCCAGAACTACTTAGCTTTGTGTCAAGTCTAATTTCCATGA
GAAGAGGCCCAATGCCAACACAATGCCTAATATATAAAAAAAAATTATCT
AATCTTATGAAGTCTTTTACATTTTTGCATAGACTTTATCTCTAACATTT
CTACCCAGATAATAAATCAAACTTTCTTAGGACCTGGTTCCATGACTACC
ATTGTCTGATTCTGCCTGACTTGTGTGATGACCCACATATGCCAATGTCT
TATACCCTTGATAACTTGGCTTTACCACCTGAGCCTAGGGTAGGACCTTT
GTGGAACCCAAGGTATAGTTTATCACAGATAATCTCTTTCTCTCTTGAAA
TTCTAGACACAAAGTTATATCAGGCAGCAGGATGCACTCCAGTTCTTTTA
CGGAGCCAAAATATCCATGCATTGATTCTGCCACTGCTATTGACACAGAA
TAAGAGTAGAAGGTGTAGATAGCAAAGAAGGAATCATAGCTCTTGCTGCC
TAGGAACAGGAGCCTGGTTCCTATTTTCTATTTATGGCCTTGACCTACAG
CTCATGATAGTTGCAGCCATTTCTAGAACAATAAAGTATCAAGATGAAGT
GGGCTGGTGTGAACAAGCCTATG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTGTAGGCAGCATATTTCTGGACTTTG
CTTTCATATCTATTCATTCCATTCTTCTATATATCCTAATTGAGTATTTT
AGACTATAGATTCAAAGTCACTACAGATATTTAAGGGCTTATTGCAGCCA
TTTTTATTATATATGTTCTATTTGTTTGGACTATTTTGTACTGTATTCTT
CTTTTATGTTTTTAATGTTGTGCTTTGATAGTTCATCTTTTATTAGATAT
TTTCTTTATTTACAATTCAAATGTTATCCCCTTTCCTAGTTTCCCCTCCA
AAAATCCCCTATCCTTTCCCCCCTGCCCCCTGCTCACCAACCCACACACA
CCTACTTCCTGGCCCTGGAATTCCCCTATACTGGGGCATAGAACCTTCAC
AGGACCAAGGGCCTCTCCTTCCAATGATGACTGATAGGCCATCCTCAGCT
ACCTATACAGCTAGAGCCATGAGTCCTACCATGTGTTTTCTTTGATTGGT
GGTTTAATCCCAGGGAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTT
CCTCCTATGGGGCTGCAAACCCCTTCAGTTCCTTGGTCTTTTCTCTAGCT
CCTTCTTTGGNGACCCTGTGCTTCATCCAACAGATGGCTGTGAGCTTCCA
CTTCTGTATTTGTCAGGTACTGG

Query= MSMg01no073_k15.b1 MSMg01no073_k15.b1 CHROMAT_FILE:
MSMg01no073_k15.b1 PHD_FILE: MSMg01no073_k15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:48 2005
         (660 letters)



>mm_chr12_98955360_98956418
          Length = 1059

 Score = 1102 bits (570), Expect = 0.0
 Identities = 633/656 (96%), Gaps = 5/656 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcctaaaactaattgtttttatccttgaagtgattgggatgctacaaaacaaggaa 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctaaaacttattgtttttatccttgaagtgattgggatgctacaaaacaaggaa 264

                                                                       
Query: 65  atgccccagaactacttagctttgtgtcaagtctaatttccatgagaagaggcccaatgc 124
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| 
Sbjct: 265 atgccccagaactacttagttttgtgtcaagtctaatttccatgagaagaggcccaatg- 323

                                                                       
Query: 125 caacacaatgcctaatatataaaaaaaaattatctaatcttatgaagtcttttacatttt 184
           ||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caacacaatgcctaatat----aaaaaaattatctaatcttatgaagtcttttacatttt 379

                                                                       
Query: 185 tgcatagactttatctctaacatttctacccagataataaatcaaactttcttaggacct 244
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 380 tgcatagactttatctctaacattcctacccagataataaatcaaactttcttaggacct 439

                                                                       
Query: 245 ggttccatgactaccattgtctgattctgcctgacttgtgtgatgacccacatatgccaa 304
           |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 440 ggttccatgactaccattgtctgattttgcctgacttgtgtgatgacccacatacgccaa 499

                                                                       
Query: 305 tgtcttatacccttgataacttggctttaccacctgagcctagggtaggacctttgtgga 364
           |||||||||  ||||| |||||||| | | ||||||||||| ||||||||||||||||||
Sbjct: 500 tgtcttatatacttgagaacttggcctcagcacctgagcctggggtaggacctttgtgga 559

                                                                       
Query: 365 acccaaggtatagtttatcacagataatctctttctctcttgaaattctagacacaaagt 424
           ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 560 accaaaggtatagtttatcacagataatctctttctctcttgaaattctagacaaaaagt 619

                                                                       
Query: 425 tatatcaggcagcaggatgcactccagttcttttacggagccaaaatatccatgcattga 484
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tatatcaggcagcaggatacactccagttcttttacggagccaaaatatccatgcattga 679

                                                                       
Query: 485 ttctgccactgctattgacacagaataagagtagaaggtgtagatagcaaagaaggaatc 544
           ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 680 ttctgcccctgctattgacacagaataagagtagaaggcgtagatagcaaagaaggaatc 739

                                                                       
Query: 545 atagctcttgctgcctaggaacaggagcctggttcctattttctatttatggccttgacc 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 atagctcttgctgcctaggaacaggagcctggttcctattttctatttatggccttgacc 799

                                                                   
Query: 605 tacagctcatgatagttgcagccatttctagaacaataaagtatcaagatgaagtg 660
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 800 tacagctcatgatagttgcagccatttctagaacaataaagtatcatgatgaagtg 855


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1059
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1049
Effective search space:   681850
Effective search space used:   681850
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)