Query= MSMg01no074_f19.b1 MSMg01no074_f19.b1 CHROMAT_FILE:
MSMg01no074_f19.b1 PHD_FILE: MSMg01no074_f19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:42 2005
(317 letters)
>mm_chr12_92300609_92301326
Length = 718
Score = 557 bits (288), Expect = e-163
Identities = 306/312 (98%), Gaps = 1/312 (0%)
Strand = Plus / Minus
Query: 7 gaattc-agaaataaaatcctgtgtacttcagtgctggcttaggaagccaaggttcagat 65
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gaattcaagaaataaaatcctgtgtacttcagtgctggcttaggaagccaaggttcagat 271
Query: 66 gcatgagacagcgctcacactgcagacacttgactcggcagcggccacgtgaagcaggaa 125
||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||
Sbjct: 270 gcatgagacagcgctcacactgcagacacttgactcgacagcagccatgtgaagcaggaa 211
Query: 126 aacaggactggggatgtggctcaggggtgaagagcctgcctatcatatacaagactgtgg 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 aacaggactggggatgtggctcaggggtgaagagcctgcctatcatatacaagactgtgg 151
Query: 186 gtttgctctctagcaccgcacagggtgaaaagttaggaacccagtagaatacagagcatg 245
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 gtttggtctctagcaccgcacagggtgaaaagttaggaacccagtagaatacagagcatg 91
Query: 246 ctgctttatggcaaactactatgtagtactaacaaggcatatttgaagaagtgaagatcg 305
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 90 ctgctttatggcaaactactatgtagtactaacaaggcatatttgaagaagtgaagattg 31
Query: 306 ccatgctcttgt 317
||||||||||||
Sbjct: 30 ccatgctcttgt 19
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 718
Length adjustment: 9
Effective length of query: 308
Effective length of database: 709
Effective search space: 218372
Effective search space used: 218372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no074_f19.g1 MSMg01no074_f19.g1 CHROMAT_FILE:
MSMg01no074_f19.g1 PHD_FILE: MSMg01no074_f19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:42 2005
(289 letters)
>mm_chr12_92099782_92100470
Length = 689
Score = 514 bits (266), Expect = e-150
Identities = 284/290 (97%), Gaps = 2/290 (0%)
Strand = Plus / Plus
Query: 1 atttgaccaaa-tattatttgcacaaccctttataaaaatggaaaatatttaatcttcag 59
||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 atttgaccaaaatattatttgcacaaccctttataaaaatggaaaatatttagtcttcag 260
Query: 60 aaatgtatagtagtggggtacctcccatagtgcatagctaatgacaggtactgttctcag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 aaatgtatagtagtggggtacctcccatagtgcatagctaatgacaggtactgatctcag 320
Query: 120 atcaaataggacttaattcaatgatcctgggtaacaagtcttattttacttttcatttat 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 atcaaataggacttaattcaatgatcctgggtaacaagtcttattttacttttcttttat 380
Query: 180 agataagatgatagaagtatttagactagaggctccaagactttcaaagaggtatggaca 239
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 agataagatgatagaagtatttagactagaggctccaagactttcaaagaggcatggaca 440
Query: 240 gcatgggggtggggggtaaattgaggctttcacgtcctaagattcactca 289
||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 gcatgggggtggggg-taaattgaggctttcacgtcctaagattcactca 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
