Query= MSMg01no075_h21.b1 MSMg01no075_h21.b1 CHROMAT_FILE:
MSMg01no075_h21.b1 PHD_FILE: MSMg01no075_h21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:10 2005
(477 letters)
>mm_chr12_104024563_104025438
Length = 876
Score = 899 bits (465), Expect = 0.0
Identities = 474/477 (99%), Gaps = 1/477 (0%)
Strand = Plus / Plus
Query: 1 ccacaccttccttgcttctaggtaggttctaattttagatctaaatttaggtgtggggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccacaccttccttgcttctaggtaggttctaattttagatctaaatttaggtgtggggct 260
Query: 61 agagagatagctcactaattaagagcactgactgctcttccaaaggacctgtgttcaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagagatagctcactaattaagagcactgactgctcttccaaaggacctgtgttcaatt 320
Query: 121 ccaagtacccacatggtggctcacagccatctgtagttacagttctaggggatccaataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccaagtacccacatggtggctcacagccatctgtagttacagttctaggggatccaataa 380
Query: 181 cttcttctttcatgggcaccaggtgtgcatgtggtacacagactatatatgcatacaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttcttctttcatgggcaccaggtgtgcatgtggtacacagactatatatgcatacaaca 440
Query: 241 caatcatacacaccaaaatattaacaattaaaaaaaacaaaccaacttgggtcttcttga 300
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 441 caatcatacacaccaaaatattaacaattaaaaaaa-caaaccaacttgggtcttcttga 499
Query: 301 ttgcacaagaaaactttgaacacaaagctatctccaacattctaggcttggttctttgag 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tcgcacaagaaaactttgaacacaaagctatctccaacattctaggcttggttctttgag 559
Query: 361 agagggtggccctagctggcctcaaatttgcagcacttctcattctttgcttcttgtgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agagggtggccctagctggcctcaaatttgcagcacttctcattctttgcttcttgtgca 619
Query: 421 cagagattactgatgtatcactatgcccagcttttttaaattttcattttctaagtg 477
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 620 cagagattactgatgtatcactatgcccagctttttttaattttcattttctaagtg 676
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 876
Length adjustment: 10
Effective length of query: 467
Effective length of database: 866
Effective search space: 404422
Effective search space used: 404422
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no075_h21.g1 MSMg01no075_h21.g1 CHROMAT_FILE:
MSMg01no075_h21.g1 PHD_FILE: MSMg01no075_h21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:10 2005
(584 letters)
>mm_chr12_104099349_104100332
Length = 984
Score = 1114 bits (576), Expect = 0.0
Identities = 582/584 (99%)
Strand = Plus / Minus
Query: 1 ttcgtatgtgctactgtctccccagttttctgtgagtctttcctgattgcagtttccatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 ttcgtatgtgctactgtctccccagttttctgtgagtctttcctgattgcagtttccatt 608
Query: 61 tctaagcacctcatttattaataagtattcactaccagccaggcattcttgacagtcctt 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 607 tctaagcacctcatttattaataagtattcactaccagccagccattcttgacagtcctt 548
Query: 121 ggcatatatagttaatgaagtaagacacagttctaatcctgtggggacatagtctgctga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ggcatatatagttaatgaagtaagacacagttctaatcctgtggggacatagtctgctga 488
Query: 181 gggcttagacagtgtctgctcctttacagagaaagaagcagtgcagctgaagtctgtgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gggcttagacagtgtctgctcctttacagagaaagaagcagtgcagctgaagtctgtgta 428
Query: 241 catttctggcagcagagaacagggatgctctctcagttttaagtgaacctcatttaaatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 catttctggcagcagagaacagggatgctctctcagttttaagtgaacctcatttaaatg 368
Query: 301 ccatttcttccctgtagcctgttctggccccacccagcctaatatatgttttccatactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ccatttcttccctgtagcctgttctggccccacccagcctaatatatgttttccatactt 308
Query: 361 ttcctcatttcttcagccccagcatttagtgcctgttcatttttctctgccccttcacag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ttcctcatttcttcagccccagcatttagtgcctgttcatttttctctgccccttcacag 248
Query: 421 aatagtcagtgtctcagctgaaatatcccaatttctttaaaaaactattttgagacaagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 aatagtcagtgtctcagctgaaatatcccaatttctttaaaaaactattttgagacaagg 188
Query: 481 actctcactgtaggccacactagctttgagttcacataataaactgcttgtctcaacttc 540
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 187 actctcactgtaggccacactagctttgagttcacatgataaactgcttgtctcaacttc 128
Query: 541 ccaaagtgtgcaccaccatgcctggctaaaaaacagctttgtac 584
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 ccaaagtgtgcaccaccatgcctggctaaaaaacagctttgtac 84
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 984
Length adjustment: 10
Effective length of query: 574
Effective length of database: 974
Effective search space: 559076
Effective search space used: 559076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
