Query= MSMg01no076_g12.b1 MSMg01no076_g12.b1 CHROMAT_FILE:
MSMg01no076_g12.b1 PHD_FILE: MSMg01no076_g12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:22 2005
(355 letters)
>mm_chr12_74410081_74410836
Length = 756
Score = 630 bits (326), Expect = 0.0
Identities = 344/350 (98%), Gaps = 1/350 (0%)
Strand = Plus / Plus
Query: 7 gaattcacgtaggctgacaagtctggacttgtaacatctccctattgtagtagactctgg 66
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcacgtaggctgagaagtctggacttgtaacatctccctattgtagtagactctgg 266
Query: 67 ctttacagagcatgaacctttaaaggttttccccaaatttagtaccgctgctctatccat 126
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 267 ctttacagagcatgaacctttaaaggttttccccaaagttagtaccgctgctctatccat 326
Query: 127 gattgtaaggtggctagaccccagccgctagatctcagttaccactggacagtttttcct 186
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 327 gattgtaaggtggctagaccccagccgctaggtctcagttaccactggacagtttttcct 386
Query: 187 gcttttggtatttcagaacatttaagagaatcccaggtctcccctagatggtctacaaga 246
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 387 gcttttggtatttcagaacatttaagagaatcccaggtctcccctagatggcctacaaga 446
Query: 247 tgagagctaccagatgcctctcagttggttacagtattagtgtgctgacattgctttttt 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tgagagctaccagatgcctctcagttggttacagtattagtgtgctgacattgctttttt 506
Query: 307 ttttt-accatagttagaaacttagcaagaatataaaataaccattaata 355
||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 507 ttttttaccatagttagaaacttagtaagaatataaaataaccattaata 556
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 355
Length of database: 756
Length adjustment: 9
Effective length of query: 346
Effective length of database: 747
Effective search space: 258462
Effective search space used: 258462
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_g12.g1 MSMg01no076_g12.g1 CHROMAT_FILE:
MSMg01no076_g12.g1 PHD_FILE: MSMg01no076_g12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:22 2005
(511 letters)
>mm_chr12_74539261_74540171
Length = 911
Score = 760 bits (393), Expect = 0.0
Identities = 425/437 (97%), Gaps = 4/437 (0%)
Strand = Plus / Minus
Query: 75 aacaaacaaacaaacaaaaccaagaggcaggcatggtggtgcatacatttaatcccaaca 134
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 904 aacaaacaaacaaacaaaaccaagaggcaggcatggtggtgcacacatttaatcccaaca 845
Query: 135 ctcaggaggcagaggcaggcagacctctccaagtgtgaagttagcctggtttacagagtt 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 ctcaggaggcagaggcaggcagacctctccaagtgtgaagttagcctggtttacagagtt 785
Query: 195 agtccagggctacacagagaaaccgggtctcctaaaaacaaaacaaaacaaaacaaaaca 254
||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 784 agtccagggctacacagagaaaccgggtctcct-aaaacaaaacaatacaaaacaaaaca 726
Query: 255 aaacaacaaaacaaaaaagcaagtaggcaaacagataatcaaagaaaaacaatcggatcg 314
| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 725 a---aacaaaacaaaacagcaagtaggcaaacagataatcaaagaaaaacaatcggattg 669
Query: 315 attttgtgaagagatgccatgtaagagaaagtgaaacagaccacactgtccaaaaggctt 374
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 668 attttgtgaagagatgccatgtaagagaaagtgaaacagaccacactgttcaaaaggctt 609
Query: 375 ggggacttccctgtagacctgggctactctcaagtgttgacagaatctctttgaaaactc 434
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ggggacttccctgtagacttgggctactctcaagtgttgacagaatctctttgaaaactc 549
Query: 435 agtacatttccagaaggagaagccatgagagcttccctatcagttgacagccacagcaca 494
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 548 agtacatttccagaaggagaagccatgagagcttccctatcagttgacagccgcagcaca 489
Query: 495 aacactaaaagcagagt 511
|||||||||||| ||||
Sbjct: 488 aacactaaaagcggagt 472
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
