Query= MSMg01no080_e22.b1 MSMg01no080_e22.b1 CHROMAT_FILE:
MSMg01no080_e22.b1 PHD_FILE: MSMg01no080_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:10 2005
(372 letters)
>mm_chr12_85099270_85100041
Length = 772
Score = 687 bits (355), Expect = 0.0
Identities = 364/367 (99%)
Strand = Plus / Plus
Query: 5 ggaattcttttatgtgccttggtattttgcctgcatgtgtgtcagggtgacagtgtcaga 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattcttttatgtgcattggtattttgcctgcatgtgtgtcagggtgacagtgtcaga 264
Query: 65 tcttgggagtcacagacagttgtgagctgccatgtgggaatcaaatcccggtcctctgga 124
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 265 tcttgggagtcacagacagttgtgagctgccatgtgggaatcaaaccccggtcctctgga 324
Query: 125 ggagcattcagtgctgttaaccaccaagtcatttttccagcccctaaatcattttttcta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggagcattcagtgctgttaaccaccaagtcatttttccagcccctaaatcattttttcta 384
Query: 185 aataactgtttgtgcaccaattggctctggattgagcggcagacttgccaggtctctgtg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aataactgtttgtgcaccaattggctctggattgagcggcagacttgccaggtctctgtg 444
Query: 245 agcccagtagatcagttcttgtctttaaacgtgattgactggagaggtcaggcctgctcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agcccagtagatcagttcttgtctttaaacgtgattgactggagaggtcaggcctgctcc 504
Query: 305 ttgacgccgctctgcctagtttctgccttctcagcaccagaggcctctacatagcagtaa 364
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttgacgccgctctgcctaggttctgccttctcagcaccagaggcctctacatagcagtaa 564
Query: 365 ggatgca 371
|||||||
Sbjct: 565 ggatgca 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_e22.g1 MSMg01no080_e22.g1 CHROMAT_FILE:
MSMg01no080_e22.g1 PHD_FILE: MSMg01no080_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:10 2005
(512 letters)
>mm_chr12_85220216_85221125
Length = 910
Score = 777 bits (402), Expect = 0.0
Identities = 454/480 (94%), Gaps = 19/480 (3%)
Strand = Plus / Minus
Query: 2 aggccagcctggtctacaaagtgagttccaggacagccagggctacacagagaaaccctg 61
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 aggccagactggtctacagagtgagttccaggacagccagggctacacagagaaaccctg 411
Query: 62 tctcgaaaaaccaaaaaaaaaaaaaaaaaaagtttttagagggcaaggactgcactttat 121
|||| || |||||||||||||||||||| |||| |||||||| |||||||||||||
Sbjct: 410 tctc----aa--aaaaaaaaaaaaaaaaaaaggtttt-gagggcaaagactgcactttat 358
Query: 122 atttatgaattgacctaagcaattgaaaactcttcatgttctgttagcaaaagtatttgt 181
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 357 atttatg-attgacctaagcaattgaaaactcttcatgttctgttagcaaaaatatttgt 299
Query: 182 agcagatgtttttagttttggtaaaaatctaaattttataaacaaaattagt-------- 233
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 agcagatgtttttagttttggtaaaaatctaaattttataaacaaaattagttttgtttt 239
Query: 234 -tattttttttaaggattttagaatcaggaatctgtttattttttaagatcaaacaacta 292
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 gttttttttttaaggattttagaatcaggaatctgtttattttttaagatcaaacaacta 179
Query: 293 tttttgttattgaaaatagatttttttcatagaatatattgattacagttctcctccccc 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 tttttgttattgaaaatagatttttttcatagaatatattgattacagttctcctccccc 119
Query: 353 aactctgcccagatccttcccacccacccaaatccataaatacccttttttgttctctat 412
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 aagtctgcccagatccttcccacccacccaaatccataaatacccttttttgttctctat 59
Query: 413 tattagaaaaaaaaaatagacatctaggggaaaaaagtataaacaatcttagcccaacca 472
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 tattag--aaaaaaaatagacatctaggggaaaaaagtataaacaatcttagcccaacca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 910
Length adjustment: 10
Effective length of query: 502
Effective length of database: 900
Effective search space: 451800
Effective search space used: 451800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
