Query= MSMg01no080_o10.b1 MSMg01no080_o10.b1 CHROMAT_FILE:
MSMg01no080_o10.b1 PHD_FILE: MSMg01no080_o10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:56 2005
(527 letters)
>mm_chr12_119380471_119381397
Length = 927
Score = 890 bits (460), Expect = 0.0
Identities = 506/530 (95%), Gaps = 19/530 (3%)
Strand = Plus / Minus
Query: 5 gaattcctttattt-actggttttcttatagagatgggaaacttgctttgggaccttggc 63
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gaattcctttatttaac-ggttttcttatagagatgggaaacttgctttgggaccttggc 509
Query: 64 acttcattaatgaagttattgctcaccatgtttaatgccattatgaaagtataatgaaca 123
||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 508 acttcattaatgaagttattgctaaccatgtttaatggcattatgaaagtataatgaaca 449
Query: 124 gctgcttataaggttggaagtcaccctaact--aagtgtcccttttcttcctctttatga 181
||||||||||||||||||||||| || | | |||||||||||||||||||||||||||
Sbjct: 448 gctgcttataaggttggaagtca--cttagttaaagtgtcccttttcttcctctttatga 391
Query: 182 aaatgtcaacatgcagattgaacacgggcatgaaattctgaacaagaatatgccattcac 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 aaatgtcaacatgcagattgaacacgggcatgaaattctgaacaagaatatgccattcac 331
Query: 242 ctctggaaatattaagtgggccagaatgctccttgaacgccttcaaatgttctggtcaaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ctctggaaatattaagtgggccagaatgctccttgaacgccttcaaatgttctggtcaaa 271
Query: 302 ctttacatctcttcattatctgtgagtagttagccttactctgtggtaaattgtgcagat 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ctttacatctcttcattatctgtgagtagttagccttactctgtggtaaattgtgcagat 211
Query: 362 attata------ccccccctgagtatcgagacaggatctctgcagcccacacggtcctca 415
|||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 attataggtgtt-------tgagtatcgagacaggatctctgcagcccacacggtcctca 158
Query: 416 aatgcgttcattaggtagccaaggatgacctcaaagtcctgattttactgcctccagttc 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 aatgcgttcattaggtagccaaggatgacctcaaagtcctgattttactgcctccagttc 98
Query: 476 tcagatgctagaatcataggcaagtatcaccacgcctggctgactttcac 525
|||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 97 tcagatgctagaatcataggcaagtatcaccatgcctggctgactttcac 48
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_o10.g1 MSMg01no080_o10.g1 CHROMAT_FILE:
MSMg01no080_o10.g1 PHD_FILE: MSMg01no080_o10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:56 2005
(332 letters)
>mm_chr12_119286227_119286958
Length = 732
Score = 634 bits (328), Expect = 0.0
Identities = 331/332 (99%)
Strand = Plus / Plus
Query: 1 aaaagtgactgactccgtaacaggatctcactatgtatctctggctatcctgaaatttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaagtgactgactccgtaacaggatctcactatgtatctctggctatcctgaaatttgc 260
Query: 61 tacagagaccaggctggccttgaactcacagagatagtgcctctgctgggattaaacatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacagagaccaggctggccttgaactcacagagatagtgcctctgctgggattaaacatg 320
Query: 121 ttcaccaccagtcttggctccaaaacaactgatttgggctgcctggcattccctctcttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcaccaccagtcttggctccaaaacaactgatttgggctgcctggcattccctctcttg 380
Query: 181 tcctcctatctaccatcctcaaggcaacaattctcctaaatgtttctcagctgtgcctac 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccacctatctaccatcctcaaggcaacaattctcctaaatgtttctcagctgtgcctac 440
Query: 241 aggcaggtcacctctcctccaagcctcagcagctgtagagaggcagacagagtagccatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggcaggtcacctctcctccaagcctcagcagctgtagagaggcagacagagtagccatc 500
Query: 301 tactttacagatggatgtgggggtaaagttgt 332
||||||||||||||||||||||||||||||||
Sbjct: 501 tactttacagatggatgtgggggtaaagttgt 532
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
