Query= MSMg01no081_c01.b1 MSMg01no081_c01.b1 CHROMAT_FILE:
MSMg01no081_c01.b1 PHD_FILE: MSMg01no081_c01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:14 2005
(438 letters)
>mm_chr12_49422731_49423568
Length = 838
Score = 764 bits (395), Expect = 0.0
Identities = 411/417 (98%), Gaps = 2/417 (0%)
Strand = Plus / Plus
Query: 24 agtgctgaaagtgataattctctttaactaaacagaaactgagccacattagagactctt 83
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 222 agtgctgaaagtgataattctttttaactaaacagaaactgagccacattagagactctt 281
Query: 84 tcagtttctgtattccattcttgctctacctgtgaaagacaaatagaattttctttgaaa 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tcagtttctgtattccattcttgctctacctgtgaaagacaaatagaattttctttgaaa 341
Query: 144 acttttctagatataacctgaaactctcctgtgtttgttaagtgccttgtcaacccggta 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 acttttctagatataacctgaaactctcctgtgtttgttaagtgccttgtcaacccggta 401
Query: 204 ctaaatg--ttttttttttaaataattctttattttaattttcctgacagaagccttgtg 261
||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 402 ctaaatgtttttttttttttaataattctttattttaattttcctgacagaagtcttgtg 461
Query: 262 aagaatacagatatgtaatgaatatttcataaagctgtgatttattaggacttttctaac 321
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 aagaatacagatatgcaatgaatatttcataaagctgtgatttattaggacttttctaac 521
Query: 322 tttgcttcaagaattattcattcttcagaaagcaaacacacaaaaactacctgctggtta 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tttgcttcaagaattattcattcttcagaaagcaaacacacaaaaactacctgctggtta 581
Query: 382 tagtaactaaaaaaatcccctgtggacaattctgactgtcgtaacaacttctgagcc 438
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 tagtaactaaaaaaatcccctgtggacaattctgactgtcgtaacaacttctgagcc 638
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space: 355641
Effective search space used: 355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no081_c01.g1 MSMg01no081_c01.g1 CHROMAT_FILE:
MSMg01no081_c01.g1 PHD_FILE: MSMg01no081_c01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:14 2005
(219 letters)
>mm_chr12_49630412_49631030
Length = 619
Score = 416 bits (215), Expect = e-121
Identities = 218/219 (99%)
Strand = Plus / Minus
Query: 1 atgggtatccagtattcatttttgtttggttttcaaactaacattcatttaaacatgtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 atgggtatccagtattcatttttgtttggttttcaaactaacattcatttaaacatgtga 360
Query: 61 agtaaatgtatcatggtgcacataattattaagtagattaaatcacatttttaataaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 agtaaatgtatcatggtgcacataattattaagtagattaaatcacatttttaataaatt 300
Query: 121 aaagttttgggcttttgttatgataaaggaatgtatatatataatatatgcatacatata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 aaagttttgggcttttgttatgataaaggaatgtatatatataatatatgcatacatata 240
Query: 181 tttttttcttctatcccagaacatccaataaaaactagt 219
||||||||||||||||||||| |||||||||||||||||
Sbjct: 239 tttttttcttctatcccagaatatccaataaaaactagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 219
Length of database: 619
Length adjustment: 9
Effective length of query: 210
Effective length of database: 610
Effective search space: 128100
Effective search space used: 128100
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
