Query= MSMg01no082_c06.b1 MSMg01no082_c06.b1 CHROMAT_FILE:
MSMg01no082_c06.b1 PHD_FILE: MSMg01no082_c06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:32 2005
(170 letters)
>mm_chr12_66971472_66972041
Length = 570
Score = 329 bits (170), Expect = 6e-95
Identities = 170/170 (100%)
Strand = Plus / Minus
Query: 1 gggggataataagagaaaactcagacctagacagagatgcaaatatccaagtgtaggaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gggggataataagagaaaactcagacctagacagagatgcaaatatccaagtgtaggaaa 311
Query: 61 gctgaggttctgttcagattctattcatcttatcgacacactaatcacatcagactccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gctgaggttctgttcagattctattcatcttatcgacacactaatcacatcagactccaa 251
Query: 121 aaggaggttggttgatgtagaaatattcaattctataagagaaaaagaaa 170
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 aaggaggttggttgatgtagaaatattcaattctataagagaaaaagaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 170
Length of database: 570
Length adjustment: 8
Effective length of query: 162
Effective length of database: 562
Effective search space: 91044
Effective search space used: 91044
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no082_c06.g1 MSMg01no082_c06.g1 CHROMAT_FILE:
MSMg01no082_c06.g1 PHD_FILE: MSMg01no082_c06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:33 2005
(576 letters)
>mm_chr12_66813725_66814700
Length = 976
Score = 1029 bits (532), Expect = 0.0
Identities = 554/562 (98%), Gaps = 3/562 (0%)
Strand = Plus / Plus
Query: 1 aattcagtcaaaataatcaaggcatttttgagatgatacttaggagtgcatgagttttga 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 aattcagtcaaaataatcaaggcattttcgagatgatacttaggagtgcatgagttttga 260
Query: 61 gtatctcaaatgggatttttcacaccactcactacgctcctcaattttcttcctgtttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtatctcaaatgggatttttcacaccactcactacgctcctcaattttcttcctgtttta 320
Query: 121 aataaaacatttccgtgtttagtattgtagtctctaaagagaagctgacagccgaggaat 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 aataaaacatttccgtgtttagcattgtagtctctaaagagaagctgacagccgaggaat 380
Query: 181 cactgtgcataagtctgtccacgtggttgaggttgtgtctcgaccaactctagcatgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cactgtgcataagtctgtccacgtggttgaggttgtgtctcgaccaactctagcatgaaa 440
Query: 241 ggaatgaatgaggcattcaacatgcacaggacactaattctaagtagcaattttgctttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggaatgaatgaggcattcaacatgcacaggacactaattctaagtagcaattttgctttc 500
Query: 301 ttttataattcacagacacaaatactgcacattgacatatttctggaaatcatgactagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttttataattcacagacacaaatactgcacattgacatatttctggaaatcatgactagg 560
Query: 361 catttactaaaatatgcaatgcatttattctaatgtgtttgaaggtatttcaatcctcct 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatttactaaaatatgcaatgcatttattctaatgtgtttgaaggtatttcaatcctcct 620
Query: 421 aaactctgatgctgtgttttaaataccatttttcctactttaagcattcttaggcccttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaactctgatgctgtgttttaaataccatttttcctactttaagcattcttaggcccttc 680
Query: 481 agattttctttagcttcattacttccagcttaaataatcatcacatttagctagct--at 538
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 681 agattttctttagcttcattacttccagcttaaataatcatcacatttagctagttttat 740
Query: 539 atatgtatatatatat-tatat 559
|||| ||||||||||| |||||
Sbjct: 741 atatatatatatatatgtatat 762
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space: 546756
Effective search space used: 546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
