Query= MSMg01no082_o24.b1 MSMg01no082_o24.b1 CHROMAT_FILE:
MSMg01no082_o24.b1 PHD_FILE: MSMg01no082_o24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:32 2005
(267 letters)
>mm_chr12_108723325_108723990
Length = 666
Score = 462 bits (239), Expect = e-135
Identities = 260/267 (97%), Gaps = 1/267 (0%)
Strand = Plus / Plus
Query: 1 ttcaaaaaaagaaattaactttcctggaggtctgtttggccatctgcaaacagaacacac 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 ttcaaaaaaagaaattaactttcctggaggtctgtttggccagctgcaaacagaacacac 260
Query: 61 ccagaaggagaaagctatacttagaagttcttaatttcaacagggtccaggtgagcctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccagaaggagaaagctatacttagaagttcttaatttcaacagggtccaggtgagcctgt 320
Query: 121 gtctgcgtgccctctgccaaacgtctctcaaaggggagccatgggatgtccctgtggtca 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtctgcgtgccctctgccaaacttctctcaaaggggagccatgggatgtccctgtggtca 380
Query: 181 ggaagacacttatgatataacctccgaggatgaaagccagttggttatcacttgtctgaa 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaagacacttctgatataacctccgaggatgaaagccagttggttatcacttgtctgaa 440
Query: 241 actcttgagatcagtatttattttata 267
| |||||||||||| | | ||||||||
Sbjct: 441 attcttgagatcagaaat-attttata 466
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 267
Length of database: 666
Length adjustment: 9
Effective length of query: 258
Effective length of database: 657
Effective search space: 169506
Effective search space used: 169506
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no082_o24.g1 MSMg01no082_o24.g1 CHROMAT_FILE:
MSMg01no082_o24.g1 PHD_FILE: MSMg01no082_o24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:32 2005
(253 letters)
>mm_chr12_108845879_108846531
Length = 653
Score = 466 bits (241), Expect = e-136
Identities = 250/253 (98%)
Strand = Plus / Minus
Query: 1 agaataaaggagtagcaggcacacttggaagcagaggcacccaagagccagaattccagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 agaataaaggagtagcaggcacacttggaagcagaggcacccaagagccagaattccagg 394
Query: 61 gcctctcacctggagaggaatggatagagcacctccaagaaaacagagaaaatggaaaac 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 393 gcctctcacctggagaggaatggatagagcacctccaagaaaacagagaaaacggaaaac 334
Query: 121 ccttattggcctcccaccccagtgcaggcatatatgagtcctcctcagaggcccaaggtg 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 333 ccttattggcctcccaccccagtgcaggcatatctgagtcctcctcagaggcccaaggtg 274
Query: 181 agtatttaagtagccacaagaagtgaaagagctgctagtaagtgataaaattttaagttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 273 agtatttaagtagccacaagaagtgaaagagctgctagtaagtgataaaattttaggttg 214
Query: 241 aactgatcccatc 253
|||||||||||||
Sbjct: 213 aactgatcccatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 253
Length of database: 653
Length adjustment: 9
Effective length of query: 244
Effective length of database: 644
Effective search space: 157136
Effective search space used: 157136
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
