Query= MSMg01no083_o07.b1 MSMg01no083_o07.b1 CHROMAT_FILE:
MSMg01no083_o07.b1 PHD_FILE: MSMg01no083_o07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:45 2005
(379 letters)
>mm_chr12_16211751_16212530
Length = 780
Score = 712 bits (368), Expect = 0.0
Identities = 377/380 (99%), Gaps = 1/380 (0%)
Strand = Plus / Plus
Query: 1 cacttctcatc-catttattctctgatagtgagccctatggccagtgctagtcaccagaa 59
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacttctcatcacatttattctctgatagtgagccctatggccagtgctagtcaccagaa 260
Query: 60 acgccaagggtcggagccaagctatgggctaagcagggaggatgcaggcactgtggtgaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acgccaagggtcggagccaagctatgggctaagcagggaggatgcaggcactgtggtgaa 320
Query: 120 cagacgttgtcttgaggtattttgtttgtttgatgatgagaaagcagacactgggagatg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagacgttgtcttgaggtattttgtttgtttgatgatgagaaagcagacactgggagatg 380
Query: 180 acatgcttcattcaagaccaggtaatttatagctgataaagaaaaaaaatctttttaaca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acatgcttcattcaagaccaggtaatttatagctgataaagaaaaaaaatctttttaaca 440
Query: 240 catgtccatctgtctcaaatgaaaaggataaataaagaggccagctggatggttaatgtt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catgtccatctgtctcaaatgaaaaggataaataaagaggccagctggatggttaatgtt 500
Query: 300 ctagagactactaatatgccaagttcagcaaataatataatcattcattcccatttgaac 359
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 501 ctagagactactaatatgccaagttcagcaaataatataatcattcatttctatttgaac 560
Query: 360 ttcaggggagtaacattgaa 379
||||||||||||||||||||
Sbjct: 561 ttcaggggagtaacattgaa 580
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 780
Length adjustment: 9
Effective length of query: 370
Effective length of database: 771
Effective search space: 285270
Effective search space used: 285270
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_o07.g1 MSMg01no083_o07.g1 CHROMAT_FILE:
MSMg01no083_o07.g1 PHD_FILE: MSMg01no083_o07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:45 2005
(429 letters)
>mm_chr12_16304102_16304931
Length = 830
Score = 824 bits (426), Expect = 0.0
Identities = 429/430 (99%), Gaps = 1/430 (0%)
Strand = Plus / Minus
Query: 1 cccagccttccc-agaggtagctgcttttggccaccgggtcctttcacagtccttcatga 59
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 cccagccttcccaagaggtagctgcttttggccaccgggtcctttcacagtccttcatga 571
Query: 60 cttactctgttagactctggtttggtttggggacacccagacagtgccacattggataac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 cttactctgttagactctggtttggtttggggacacccagacagtgccacattggataac 511
Query: 120 agtttggtcagcagagccagataaaggcatcatagggcatgcccaaatgcagaggcatct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 agtttggtcagcagagccagataaaggcatcatagggcatgcccaaatgcagaggcatct 451
Query: 180 atagcaggttaggagggatatctctgctggcaatggggaaggctatccaaaggaggcgtt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 atagcaggttaggagggatatctctgctggcaatggggaaggctatccaaaggaggcgtt 391
Query: 240 cactctgcaaatctctgtagcaatgagacaaagcacacattctcttcaggggcttacaac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 cactctgcaaatctctgtagcaatgagacaaagcacacattctcttcaggggcttacaac 331
Query: 300 ccaagaccaaataacaactccagagtctcagagtttcctttcctctaaaagaaaaaagaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ccaagaccaaataacaactccagagtctcagagtttcctttcctctaaaagaaaaaagaa 271
Query: 360 ttaaaatagagtttaaagaacttacttttctaaggaagattgttcttctcatgagataaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ttaaaatagagtttaaagaacttacttttctaaggaagattgttcttctcatgagataaa 211
Query: 420 gggatgtaga 429
||||||||||
Sbjct: 210 gggatgtaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 830
Length adjustment: 9
Effective length of query: 420
Effective length of database: 821
Effective search space: 344820
Effective search space used: 344820
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
