Query= MSMg01no083_p09.b1 MSMg01no083_p09.b1 CHROMAT_FILE:
MSMg01no083_p09.b1 PHD_FILE: MSMg01no083_p09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:51 2005
(506 letters)
>mm_chr12_27815459_27816364
Length = 906
Score = 913 bits (472), Expect = 0.0
Identities = 493/504 (97%), Gaps = 8/504 (1%)
Strand = Plus / Plus
Query: 7 gaattctcaccttgcgttaagcctcctcctgattcacaccaagaaaaaaaggtgagagaa 66
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctcaccatgggttaagcctcctcctgattcacaccaagaaaaaaaggtgagagaa 266
Query: 67 ggttttatgtagaactcaagtagattcaaagtctcaactctggcccctatgacaaataaa 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ggttttatgtagaactcaagtagattcaaagtctcaactctggcccctatgacaaataaa 326
Query: 127 ctggaaagcattccaccaagccttatttctgagtcaatccaatatgtgctcacatctttg 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctggaaagcattccaccaagccttatttctgagtcaatccaatatgtgctcacatctttg 386
Query: 187 gctgctacttatgttcctaactaacctgataacccagctatgcagctatgaaatattttc 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gctgctacttatgttcctaactaacctgataacccagctatgcagctatgaaatattttc 446
Query: 247 ctacagaaatgctattacaagtttcagaagtatagttttgagacatcttgtctatcacaa 306
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 447 ctacagaaatgctattacaagtttcagaagtagagttttgagacatcttgtctatcacaa 506
Query: 307 gttgtgggtaaagttaatagattacaattattttccaaagggcttctttcaaagttctta 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gttgtgggtaaagttaatagattacaattattttccaaagggcttctttcaaagttctta 566
Query: 367 atgcccc----aaaaacattgattttatgttgatttcaaacaaaatataacaacaaacta 422
||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 atg----gtagaaaaacattgattttatgttgatttcaaacaaaatataacaacaaacta 622
Query: 423 atttcataatgggctatattttcatttgtgtgttgctaaacttctatatgatacttgctc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 atttcataatgggctatattttcatttgtgtgttgctaaacttctatatgatacttgctc 682
Query: 483 tctcaaagaaagggcagtcttcag 506
||||||||||||||||||||||||
Sbjct: 683 tctcaaagaaagggcagtcttcag 706
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space: 444416
Effective search space used: 444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_p09.g1 MSMg01no083_p09.g1 CHROMAT_FILE:
MSMg01no083_p09.g1 PHD_FILE: MSMg01no083_p09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:51 2005
(471 letters)
>mm_chr12_27988068_27988938
Length = 871
Score = 903 bits (467), Expect = 0.0
Identities = 470/471 (99%)
Strand = Plus / Minus
Query: 1 acatcctctcatccatcagatcactctgtaaattaagatgctgaactgtctgtgcaaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 acatcctctcatccatcagatcactctgtaaattaagatgctgaactgtctgtgcaaagt 612
Query: 61 ctgctgttcttggctcactacagagactggacccacaacttctcttccaaaggatgcagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ctgctgttcttggctcactacagagactggacccacaacttctcttccaaaggatgcagg 552
Query: 121 caatttatttaagagtcagtgaaggtaagagtcaaaataatgctatcctgccacccacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 caatttatttaagagtcagtgaaggtaagagtcaaaataatgctatcctgccacccacat 492
Query: 181 tctcttgaattgagagatggttctgagagatgtttatatgggactggctgaggtaactgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tctcttgaattgagagatggttctgagagatgtttatatgggactggctgaggtaactgt 432
Query: 241 tctgaggcaggagggaatgtcaaagttagatttaacaactgtggattaagtggggaaact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tctgaggcaggagggaatgtcaaagttagatttaacaactgtggattaagtggggaaact 372
Query: 301 aagatagaatcagaacacatctgagtacatgcgcttgccccaacttcaaactctgagggt 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 371 aagatagaatcagaacacatctgagtacatgcgcttgctccaacttcaaactctgagggt 312
Query: 361 ccctatcaacagcaagtggtgtttaagatggacactaacacacagtttctatgccgtcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ccctatcaacagcaagtggtgtttaagatggacactaacacacagtttctatgccgtcag 252
Query: 421 acacaagtctttattcaaacaacacttccttttatctggtgttgcctgagt 471
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 acacaagtctttattcaaacaacacttccttttatctggtgttgcctgagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
