Query= MSMg01no086_l09.b1 MSMg01no086_l09.b1 CHROMAT_FILE:
MSMg01no086_l09.b1 PHD_FILE: MSMg01no086_l09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:33 2005
(549 letters)
>mm_chr12_57855232_57856181
Length = 950
Score = 1011 bits (523), Expect = 0.0
Identities = 535/539 (99%), Gaps = 1/539 (0%)
Strand = Plus / Minus
Query: 12 gaattcattcctatacctatctttc-atgaagctaccaagttgcctctctattaccatcc 70
||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 750 gaattcattcctatagttatctttcaatgaagctaccaagttgcctctctattaccatcc 691
Query: 71 agagaaaatacactttagtctttcactttcctggcagtgccaggttccctagatttttat 130
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 690 agagaaaatacactttagtctttcactttcctggcggtgccaggttccctagatttttat 631
Query: 131 tttcaaaaaccaagactttgaagcaataacagctcccatttatacaacatctatatgcca 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 tttcaaaaaccaagactttgaagcaataacagctcccatttatacaacatctatatgcca 571
Query: 191 gacaccgcaagatgacttacacgatttccccttttgcttaatactgggaatgtgttatgt 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gacaccgcaagatgacttacacgatttccccttttgcttaatactgggaatgtgttatgt 511
Query: 251 acagttataaactactaaagcaatgtatattgctttcataaatcaaataagagatggaga 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 acagttataaactactaaagcaatgtatattgctttcataaatcaaataagagatggaga 451
Query: 311 gcaggaaaagtgctagccgagcacacccatattctctcatcataccctgctagtcaactt 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 gcaggaaaagtgctagccgagcacacccatattctctcatcataccctgctagtcaactt 391
Query: 371 gtaacatcatctgctttttcctacactaatctgaatttcagaccctcccagtagctccgt 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gtaacatcatctgctttttcctacactaatctgaatttcagaccctcccagtagctccgt 331
Query: 431 catggtaaggtttgtcccaattttgtaagtaagtagaataagattcttcatgtcggtaat 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 catggtaaggtttgtcccaattttgtaagtaagtagaataagattcttcatgtcggtaat 271
Query: 491 tctaaggaactgaccgctaaacacaagcatgacttttgagccagtcatgttgcttctgt 549
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tctaaggaactgaccgctaaacacaagcatgacttttgagccagtcatgttgcttctgt 212
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 950
Length adjustment: 10
Effective length of query: 539
Effective length of database: 940
Effective search space: 506660
Effective search space used: 506660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no086_l09.g1 MSMg01no086_l09.g1 CHROMAT_FILE:
MSMg01no086_l09.g1 PHD_FILE: MSMg01no086_l09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:33 2005
(169 letters)
>mm_chr12_57789942_57790510
Length = 569
Score = 317 bits (164), Expect = 2e-91
Identities = 167/168 (99%)
Strand = Plus / Plus
Query: 1 gcgctttctggctctcttctggtcaaccctgacctattcagctggcattctgtccatagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcgctttctggctctcttctggtcaaccctgacctattcagctggcattctgtccatagt 260
Query: 61 gaggagtcccaggaagcaggtcctctttgacaggttctggggtttggcttaggggaggtt 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 gaggagtcccaggaagcaggtcctctttgacaggctctggggtttggcttaggggaggtt 320
Query: 121 gtctttcctaagatgtggagggggtagggagtgtttactcccattgta 168
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtctttcctaagatgtggagggggtagggagtgtttactcccattgta 368
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 569
Length adjustment: 8
Effective length of query: 161
Effective length of database: 561
Effective search space: 90321
Effective search space used: 90321
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
