Query= MSMg01no088_a15.b1 MSMg01no088_a15.b1 CHROMAT_FILE:
MSMg01no088_a15.b1 PHD_FILE: MSMg01no088_a15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:22 2005
(189 letters)
>mm_chr12_84918683_84919271
Length = 589
Score = 358 bits (185), Expect = e-103
Identities = 188/189 (99%)
Strand = Plus / Minus
Query: 1 cctagcttatttgtatattatgtacattatttcgagagcatattgttaagctagaaacac 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 389 cctagcttatttgtatattatgtacatcatttcgagagcatattgttaagctagaaacac 330
Query: 61 ttaattctgacctagataccagttgctgcttgtgggttgattttcacgggagaccctgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ttaattctgacctagataccagttgctgcttgtgggttgattttcacgggagaccctgaa 270
Query: 121 ggcctaggcttccttgcctctggtctgggcatgtagacagtcattccctccggctaccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ggcctaggcttccttgcctctggtctgggcatgtagacagtcattccctccggctaccct 210
Query: 181 ggccttagc 189
|||||||||
Sbjct: 209 ggccttagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 589
Length adjustment: 8
Effective length of query: 181
Effective length of database: 581
Effective search space: 105161
Effective search space used: 105161
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no088_a15.g1 MSMg01no088_a15.g1 CHROMAT_FILE:
MSMg01no088_a15.g1 PHD_FILE: MSMg01no088_a15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:22 2005
(233 letters)
>mm_chr12_84734445_84735076
Length = 632
Score = 317 bits (164), Expect = 3e-91
Identities = 188/200 (94%), Gaps = 8/200 (4%)
Strand = Plus / Plus
Query: 41 ctggctctccatagagtctttgatggaatcatttgtactacctgtcattgccctttctat 100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 ctggctctccatagagtctttgatggaatcatttgtactacctgtcattgccctttctat 293
Query: 101 gtggcgtcaacagaaagacatcc-------agggaaaagcaatgtagcaccctgagtcca 153
||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 294 gtggcgtcagcagaaagacatcccccacccagggaaa-gcaatgtagcaccctgagtcca 352
Query: 154 cattatatggtaatatatgaccatcaaatattagctcttgatactgtggtgtgagggctc 213
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 353 cattatatggtaatatatgaccaacaaatattagctcttgatactgtggtgtgggggctc 412
Query: 214 tgtcttccactcactgtcaa 233
||||||||||| ||||||||
Sbjct: 413 tgtcttccacttactgtcaa 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 632
Length adjustment: 9
Effective length of query: 224
Effective length of database: 623
Effective search space: 139552
Effective search space used: 139552
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
