Query= MSMg01no088_b15.b1 MSMg01no088_b15.b1 CHROMAT_FILE:
MSMg01no088_b15.b1 PHD_FILE: MSMg01no088_b15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:27 2005
(537 letters)
>mm_chr12_62498550_62499488
Length = 939
Score = 750 bits (388), Expect = 0.0
Identities = 415/424 (97%), Gaps = 2/424 (0%)
Strand = Plus / Plus
Query: 7 ggaattcc-tacatctatatgagctattgacattgttcattgtgttaagatactggtttt 65
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ggaattccatacatctatatgagctattgacattgttcattgtgttaagatactggtttt 266
Query: 66 gaggatttc-tatttttgagtcatagatcatggggaaatcaaactttccatctagtgcaa 124
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gaggataacatatttttgagtcatagatcatggggaaatcaaactttccatctagtgcaa 326
Query: 125 ttagctcatgacatatgaaaactggtagagatctgattgcagtattcttattacagaggg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttagctcatgacatatgaaaactggtagagatctgattgcagtattcttattacagaggg 386
Query: 185 ccttaatttcagtcattattataaagggcacaataattattaatataaatttaggaatta 244
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 387 ccttaatttcagtcattattataaagggcacaataattattaatacaaatttaggaatta 446
Query: 245 tcattgaatcatcattaaaaattaagaaatcatttttctacgtagcatcattatattaca 304
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 447 tcattgaatcatcattaaaaattaagaaatcatttttctccgtagcatcattatattaca 506
Query: 305 gtacatctttattgatctgcaacacatctggccaatagggtggcctaatacccaggaatt 364
||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||
Sbjct: 507 gtacatctttattgatctgtaaaaaatctggccaatagggtggcctaatacccaggaatt 566
Query: 365 tttatattaatttaataattaaagtacggacatatcaataacaagaatcaaccctgagat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tttatattaatttaataattaaagtacggacatatcaataacaagaatcaaccctgagat 626
Query: 425 tagt 428
||||
Sbjct: 627 tagt 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 939
Length adjustment: 10
Effective length of query: 527
Effective length of database: 929
Effective search space: 489583
Effective search space used: 489583
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no088_b15.g1 MSMg01no088_b15.g1 CHROMAT_FILE:
MSMg01no088_b15.g1 PHD_FILE: MSMg01no088_b15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:27 2005
(204 letters)
>mm_chr12_62566994_62567597
Length = 604
Score = 381 bits (197), Expect = e-110
Identities = 200/201 (99%)
Strand = Plus / Minus
Query: 1 ctgtatacgtccttacaaagccacatgaggagcaacacaatcgcctaaaatagtactgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ctgtatacgtccttacaaagccacatgaggagcaacacaatcgcctaaaatagtactgga 342
Query: 61 ttacaactaaagaaaaggaacaaaataagataaagatattgagaagaaaaggaacacctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ttacaactaaagaaaaggaacaaaataagataaagatattgagaagaaaaggaacacctt 282
Query: 121 ttcagaataattaaaagtgatttatataaacaaccttctttcaaagaggatgagcattat 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 281 ttcagaataattaaaagtgatttatgtaaacaaccttctttcaaagaggatgagcattat 222
Query: 181 gcttgattcatgcattatatg 201
|||||||||||||||||||||
Sbjct: 221 gcttgattcatgcattatatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 204
Length of database: 604
Length adjustment: 8
Effective length of query: 196
Effective length of database: 596
Effective search space: 116816
Effective search space used: 116816
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
