Query= MSMg01no088_o15.b1 MSMg01no088_o15.b1 CHROMAT_FILE:
MSMg01no088_o15.b1 PHD_FILE: MSMg01no088_o15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:33 2005
(488 letters)
>mm_chr12_99831800_99832687
Length = 888
Score = 888 bits (459), Expect = 0.0
Identities = 477/483 (98%), Gaps = 1/483 (0%)
Strand = Plus / Plus
Query: 5 gaattcaaggcctgcctgatctacataatgagttcaagaacagccaagactacacgaaaa 64
|||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 204 gaattcaaggccagcctgatctacataatgagttcaaggacagccaagactacacgaaaa 263
Query: 65 gaccttgtctcacaaa-taaaatgagaaaaataaaaatgagaaaagtttataagttcctt 123
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gaccttgtctcaaaaaataaaatgagaaaaataaaaatgagaaaagtttataagttcctt 323
Query: 124 gagataattaaaccataccttgaatgacttgtgtgcattttaaaggtgttttaggttaat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gagataattaaaccataccttgaatgacttgtgtgcattttaaaggtgttttaggttaat 383
Query: 184 ttattttattttgtgtatctgagtgttttacacacacgtactcatgggtaccagtggttc 243
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 384 ttattttattttgtgtatctgagtgttttacacacaggtactcatgggtaccagtggttc 443
Query: 244 caacagtgaaatgtacatgatgtactgagatgtacatggatgatgggaagccaaactcag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 caacagtgaaatgtacatgatgtactgagatgtacatggatgatgggaagccaaactcag 503
Query: 304 gtcataaactcagttcataaacttttatgacaagctctttaccacccaagccatcccccc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtcataaactcagttcataaacttttatgacaagctctttaccacccaagccatcccccc 563
Query: 364 aacccccaatgtaatgaacgtctatgtgccccaaaacacattttcaagaaagttgtcaac 423
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 564 aacccccaatgtaatgaacgtctatgtgccccaaaacacattttcaagagagttgtcaac 623
Query: 424 acataactgctccagctttataattctctccttcatgtctttactaatatgttattttga 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 acataactgctccagctttataattctctccttcatgtctttactaatatgttattttga 683
Query: 484 acc 486
|||
Sbjct: 684 acc 686
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 888
Length adjustment: 10
Effective length of query: 478
Effective length of database: 878
Effective search space: 419684
Effective search space used: 419684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no088_o15.g1 MSMg01no088_o15.g1 CHROMAT_FILE:
MSMg01no088_o15.g1 PHD_FILE: MSMg01no088_o15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:33 2005
(520 letters)
>mm_chr12_99957867_99958786
Length = 920
Score = 878 bits (454), Expect = 0.0
Identities = 481/490 (98%)
Strand = Plus / Minus
Query: 1 tacaattagttcctatgctatgggcagacaaagctttctgaaaacccataaataagggta 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tacagttagttcctatgctatgggcagacaaagctttctgaaaacccataaataagggta 431
Query: 61 ggtaccaaaagaatgagtatttggctttgggaaaaatctgcttgtagtcacagatgaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ggtaccaaaagaatgagtatttggctttgggaaaaatctgcttgtagtcacagatgaaga 371
Query: 121 aaatgtagctaattaaagtctcgtaaagcttgctagacagcaagtcattcttgtgtctct 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaatgtagctaattagagtctcgtaaagcttgctagacagcaagtcattcttgtgtctct 311
Query: 181 gggtaatgaactctgtggaataatgagtacggcttatcactttcctaaatatcattgcta 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 310 gggtaatgaactctgtggaataatgagtatggcttatcactttcctaaatatcattgcta 251
Query: 241 atctctggaactatttatacatttccctacctctccttttgctgttgtttccgccatttt 300
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 250 atctctggaactatttatacatttccctacctctccttttgctgttgtttttgttatttt 191
Query: 301 gagacaggttctcactgtgcccaagttaacctgaagttccttatgtagcccaagctggtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gagacaggttctcactgtgcccaagttaacctgaagttccttatgtagcccaagctggtc 131
Query: 361 ttgaacccatatcttattgcttcctgagtgctggaattgtaggtgtatggccactgtgtt 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ttgaaccaatatcttattgcttcctgagtgctggaattgtaggtgtatggccactgtgtt 71
Query: 421 cggctatttggatttttgtgtttgaagtagccaagtccagctgtatttaaagggaaaagt 480
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 70 cggctatttggatttttgtgtttgaagtagccaagtccagctgcatttaaagggaaaagt 11
Query: 481 aatatataca 490
||||||||||
Sbjct: 10 aatatataca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space: 464100
Effective search space used: 464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
