Query= MSMg01no089_e16.b1 MSMg01no089_e16.b1 CHROMAT_FILE:
MSMg01no089_e16.b1 PHD_FILE: MSMg01no089_e16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:42:03 2005
(267 letters)
>mm_chr12_34286758_34287426
Length = 669
Score = 433 bits (224), Expect = e-126
Identities = 253/266 (95%), Gaps = 8/266 (3%)
Strand = Plus / Minus
Query: 5 gaattcagcttctttc----tacaaatcatcagagcagaaagag-ttttccattttgatt 59
|||||||||||| | |||||||||||||||||||||||| |||||||||||||||
Sbjct: 467 gaattcagcttc---caatgtacaaatcatcagagcagaaagagattttccattttgatt 411
Query: 60 agaacctgaaatctgcccttctgatgtcactgctcagtaagatctaaactgtatatgtaa 119
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 agaacctgtaatcttcccttctgatgtcactgctcagtaagatctaaactgtatatgtaa 351
Query: 120 taaccatagggtccttatttagaaatgtgatacacagcactgccttgctgagtggggttt 179
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 350 taaccatagggtccttatttagaaatgtgatatacagcactgccttgctgagtggggttt 291
Query: 180 caattttaatgtctgatattattaaaactgcagaaataaccatatacttttcatagtggc 239
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 290 caattttaatgtctgaaattattaaaactgcagaaataaccatatacttttcatagtgac 231
Query: 240 agatagcaattattgggggatgctta 265
||||||||||||||||||||||||||
Sbjct: 230 agatagcaattattgggggatgctta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 267
Length of database: 669
Length adjustment: 9
Effective length of query: 258
Effective length of database: 660
Effective search space: 170280
Effective search space used: 170280
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no089_e16.g1 MSMg01no089_e16.g1 CHROMAT_FILE:
MSMg01no089_e16.g1 PHD_FILE: MSMg01no089_e16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:42:03 2005
(121 letters)
>mm_chr12_34140272_34140792
Length = 521
Score = 190 bits (98), Expect = 3e-53
Identities = 116/122 (95%), Gaps = 2/122 (1%)
Strand = Plus / Plus
Query: 1 ctcagagctattttaagctcaaccacaggaacattgatgctttggagctgagtctcaaga 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcagagctattttaagctcaaccaaaggaacattgatgctttggagctgagtctcaaga 260
Query: 61 ccaagtctgagtca-ctgtgggatagtccaaccctggcattacagacatggatgcctgat 119
|||||||||||||| | |||||||||||||||||||| ||| ||||| ||||||||||||
Sbjct: 261 ccaagtctgagtcagc-gtgggatagtccaaccctggtatttcagacgtggatgcctgat 319
Query: 120 ac 121
||
Sbjct: 320 ac 321
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 121
Length of database: 521
Length adjustment: 8
Effective length of query: 113
Effective length of database: 513
Effective search space: 57969
Effective search space used: 57969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
