Query= MSMg01no089_l16.b1 MSMg01no089_l16.b1 CHROMAT_FILE:
MSMg01no089_l16.b1 PHD_FILE: MSMg01no089_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:42:38 2005
(557 letters)
>mm_chr12_4842245_4843201
Length = 957
Score = 978 bits (506), Expect = 0.0
Identities = 548/570 (96%), Gaps = 14/570 (2%)
Strand = Plus / Plus
Query: 1 gtgtactaaggagtcttatttacctaccttctgggtagaatagattgggctcctgccctg 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gtgtactagggagtcttatttacctaccttctgggtagaatagattgggctcctgccctg 248
Query: 61 agttctaaatgtggcaaaggaaaaatccttctggctacccagagatacacacagatggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 agttctaaatgtggcaaaggaaaaatccttctggctacccagagatacacacagatggat 308
Query: 121 gctacagagatcaaacacaaactcatgcatatacacagttgctaagatagtcacattcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gctacagagatcaaacacaaactcatgcatatacacagttgctaagatagtcacattcac 368
Query: 181 agagatatttatgcatgctcacaagcatttacacacagacacaccggagagaagccctga 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 369 agagatatttatgcatgctcacaagcatttacacacagacacacaggagagaagccctga 428
Query: 241 tggtcaaacagatgcttagaaaatatttagatcgacagacctacatatattcatacttat 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 429 tggtcaaacagatgcttagaaaatatttagatcgacagacctacatatattcatacagat 488
Query: 301 aggcccttgccacaaatgcatgcttgaatatgtgcacatgcaca-------------ctg 347
||||||||| ||||||| ||||||||||||||||||||||||| |||
Sbjct: 489 aggcccttgg-acaaatgtatgcttgaatatgtgcacatgcacagtccatttatagactg 547
Query: 348 cctttcccatttccccaatgccttcagctttcataaagttggatctactgaaaactgtgt 407
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 548 cctttcccatttccccaatgccttcagctttcataaagttggatctactggaaactgtgt 607
Query: 408 aacagttatctgaggctgtgatttcagacaaagctacataatccagaaacaggcctacat 467
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 aacagctatctgaggctgtgatttcagacaaagctacataatccagaaacaggcctacat 667
Query: 468 aaatatgttgacttcttttgcaaagatgtttctttaatacaacaagtaaaggatggcttt 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 aaatatgttgacttcttttgcaaagatgtttctttaatacaacaagtaaaggatggcttt 727
Query: 528 ttggattaacattgctggattgaacctata 557
||||||||||||||||||||||||||||||
Sbjct: 728 ttggattaacattgctggattgaacctata 757
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space: 518009
Effective search space used: 518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no089_l16.g1 MSMg01no089_l16.g1 CHROMAT_FILE:
MSMg01no089_l16.g1 PHD_FILE: MSMg01no089_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:42:38 2005
(286 letters)
>mm_chr12_4969164_4969849
Length = 686
Score = 460 bits (238), Expect = e-134
Identities = 250/254 (98%)
Strand = Plus / Minus
Query: 1 tttcttatcacttatatttttcccatagaggtttattacttgagagcgaccatgctcagt 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 454 tttcttatcacttatatttttcccatagaggtttattacttgagagcgattatgctcagt 395
Query: 61 tgtcacgttattgcttttctcatgatttctgtgagcttatagtgacatcaatgcatctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 394 tgtcacgttattgcttttctcatgatttctgtgagcttatagtgacatcaatggatctgg 335
Query: 121 ctgatcagctagatatctctgccccattataggcagcattcatattaaccagcattcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ctgatcagctagatatctctgccccattataggcagcattcatattaaccagcattcttt 275
Query: 181 gaagatgtgtctcaaaggccagtttggtaaatgatgttgctttgggtccaattccacagt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 274 gaagatgtgtctcaaaggccagtttggtaaatgatgttgctttgggtccaatcccacagt 215
Query: 241 acagtctctctatg 254
||||||||||||||
Sbjct: 214 acagtctctctatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
