Query= MSMg01no091_o19.b1 MSMg01no091_o19.b1 CHROMAT_FILE:
MSMg01no091_o19.b1 PHD_FILE: MSMg01no091_o19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:35 2005
(491 letters)
>mm_chr12_100194615_100195505
Length = 891
Score = 816 bits (422), Expect = 0.0
Identities = 470/486 (96%), Gaps = 2/486 (0%)
Strand = Plus / Plus
Query: 7 gaattcacatctgtgtccctt-aacatggaggtcccaagtacatggtgccacacccagct 65
||||||||||||||| | ||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 207 gaattcacatctgtg-ctctttaacatggaggtcccaagtacatggtgccacaccccgct 265
Query: 66 tttcataggggctgggcacctgaattcatgtcttcatgcctgcacagccagccctttgcc 125
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tttcataggggctggggatctgaattcatgtcttcatgcctgcacagccagccctttgcc 325
Query: 126 tactgaaggcccaagcatccagttcctcctcccatgtgactagaaactgaaccccgggtt 185
||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 326 tactgaaggcctaagcatccagttcctccttccatgtgactagaaactgaaccccgggtt 385
Query: 186 ggtcatgcacgtgaggcaaatactccgccctaagcaatggcccctgcccttccaaacccc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ggtcatgcacgtgaggcaaatactccgccctaagcaatggcccctgcccttccaaacccc 445
Query: 246 tttcctatctcattacctgctccttctctctctctacatctgggtttaaaatggagactt 305
||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 446 cttcctgtctcattacctgctccttctctttctctacatctgggtttaaaatggagactt 505
Query: 306 tgagtggatctgtcttacatacagaaagctgaactccactgaattttgaggcattatcaa 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tgagtggatctgtcttacatacagaaagctgaactccactgaattttgaggcattatcaa 565
Query: 366 tctttagagagtacatacaaagtaggaagagagtaaaatcctagcattttaaatttcagt 425
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tctttagagagtagatacaaagtaggaagagagtaaaatcctagcattttaaatttcagt 625
Query: 426 tttgtgccttgtatattaaaattctattctgatatgctgtgtgtctgcttgctgtcagcc 485
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 626 tttgtgccttgtatattaaaattgtattctgatatgctgtacatctgcttgctgtcagcc 685
Query: 486 ccctgg 491
||||||
Sbjct: 686 ccctgg 691
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space: 423761
Effective search space used: 423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no091_o19.g1 MSMg01no091_o19.g1 CHROMAT_FILE:
MSMg01no091_o19.g1 PHD_FILE: MSMg01no091_o19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:35 2005
(221 letters)
>mm_chr12_100354404_100355024
Length = 621
Score = 420 bits (217), Expect = e-122
Identities = 220/221 (99%)
Strand = Plus / Minus
Query: 1 aggcgagctgtcttagagtaatggctttatgccctgttgttcttcttcagtagcaggggt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 421 aggcgagctgtcttagagtaatggctttatgccctgttgttcttcttcagtagcagtggt 362
Query: 61 gttggctacaggtagatgcctatcgctgctgttatggggtgcaggggaggttggcaaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gttggctacaggtagatgcctatcgctgctgttatggggtgcaggggaggttggcaaaac 302
Query: 121 tgtattctgccaacttgcaatgggatggagtgtccctgtcctaaggcagcttcctgtcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgtattctgccaacttgcaatgggatggagtgtccctgtcctaaggcagcttcctgtcac 242
Query: 181 cctcctgtttacttactggggttacagtgttttaaacagcc 221
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cctcctgtttacttactggggttacagtgttttaaacagcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 221
Length of database: 621
Length adjustment: 9
Effective length of query: 212
Effective length of database: 612
Effective search space: 129744
Effective search space used: 129744
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
