Query= MSMg01no092_d18.b1 MSMg01no092_d18.b1 CHROMAT_FILE:
MSMg01no092_d18.b1 PHD_FILE: MSMg01no092_d18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:01 2005
(359 letters)
>mm_chr12_119897154_119897915
Length = 762
Score = 665 bits (344), Expect = 0.0
Identities = 357/362 (98%), Gaps = 3/362 (0%)
Strand = Plus / Plus
Query: 1 cggacctcagtcagcctattgctaaggcagagcttccaaaaacactatcccatctcccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cggacctcagtcagcctattgctaaggcagagcttccaaaaacactatcccatctcccag 260
Query: 61 tatcttcttttactctttctaactttgtgcccacacacagagaaaaggacacatttttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatcttcttttactctttctaactttgtgcccacacacagagaaaaggacacatttttaa 320
Query: 121 agagtctaaaaatatatgccatccctacatttgcctctgaggcagttgggcagtttgtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagtctaaaaatatatgccatccctacatttgcctctgaggcagttgggcagtttgtgc 380
Query: 181 tgtcgagtgctctcgtacataaaccatcacccagatgttcattctctaattaaatagttt 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtcgagcgctctcgtacataaaccatcacccagatgttcattctctaattaaatagttt 440
Query: 241 gaatcgacatctgtatgatttctgccaagtttattaaatgggatttttt-atattgtacg 299
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 gaatcgacatctgtatgatttctgccaagtttattaaatgggatttttttatattgtacg 500
Query: 300 tccatgttgggtactgtagagaaaatacactttttttttttttt--aacgtaaggctgac 357
|||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 501 tccatgttgggtactgtagagaaaatacactttttttttttttttaaatgtaaggctgac 560
Query: 358 ta 359
||
Sbjct: 561 ta 562
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 762
Length adjustment: 9
Effective length of query: 350
Effective length of database: 753
Effective search space: 263550
Effective search space used: 263550
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no092_d18.g1 MSMg01no092_d18.g1 CHROMAT_FILE:
MSMg01no092_d18.g1 PHD_FILE: MSMg01no092_d18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:01 2005
(493 letters)
>mm_chr12_120049063_120049956
Length = 894
Score = 538 bits (278), Expect = e-157
Identities = 314/338 (92%), Gaps = 22/338 (6%)
Strand = Plus / Minus
Query: 1 taattttgagagagagagagagacactccccaaagtatggctctaccgttcatacatctg 60
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 337 taattttgagagagagagagagacactccccaaagtatggctctaatgttcatacatctg 278
Query: 61 ataacagataggt-aaaaaatattccaaattttaagtaggcctaactgttcatcaaggag 119
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ataacagataggtaaaaaaatattccaaattttaagtaggcctaactgttcatcaaggag 218
Query: 120 ataagaagtttatttctaaaaaaaaaa-------aaaaa-------------aaaaaacc 159
||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 217 ataagaagtttatttctaaaaaaaaaacaaaaacaaaaacaaacaaacaaacaaaaaacc 158
Query: 160 aagggagaaatttgcttagtttcatggcacaggtctgtaatatcagctatatgggagact 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 aagggagaaatttgcttagtttcatggcacaggtctgtaatatcagctatatgggagact 98
Query: 220 gaggcaggaagattgcaagctcatgatagcttgggcaacttagtgatagcttgtctagaa 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 gaggcaggaagattgcaagctcatgatagcttgggcaacttagtgatagcttgtctagaa 38
Query: 280 atgcaagatttaaaaaaaagtcagataattgctcagtg 317
||||||||||| ||||||||||||||||||||||||||
Sbjct: 37 atgcaagattt-aaaaaaagtcagataattgctcagtg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 894
Length adjustment: 10
Effective length of query: 483
Effective length of database: 884
Effective search space: 426972
Effective search space used: 426972
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
