CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTCTGTCATATTTTTTATCTCGCATTATCTAACAAGCTATGCATATACAC
AGTTTATGACCAACAACGGAAAACTATTTTTCTTCATTATTTTCACTTGC
TTTGTCACTGTATCATTAGGGGGAAAATGTCTTCTTAGCACTGCCTGAGT
CGGGAATTATAAAAAGTGTCCATGTAAGACCATGCATTTCATTTCTTCAT
AAAGGTATCAAACTTTACATCATTTAGGACTGGTTATTTTTAATTTGTGA
AAATGAGGTGTTGCCTTTAGTAAGCATGGTTTTTCTTGACCTAGAAATTT
GAAGTGGGGATAAATATCTACCTTTAATGCATTCTTTTGCAAAAATATCT
TCCTTTCGTATATCTTTATGAAGTGTGCGTTTGTGTGTGTGTGTGTGTGT
GCACGTGTGCACGTGCATGTGCATGTTTGTGTTTGAGAGGGTAAGAGATA
TATGACAATACATTTACATAGGAATGTCAATTTATTACCTACAAATAGAA
TGTGTCATTTCACCGGGAGCTCATCACTTTCAGGGAGATAGTGGCCTTTG
CATCCTACTAAAGAGCACTGGGTTACGAGAAAAGTTGGTTATGCCCCAGT
TTTTATGTAGGCGCAAGAAATTCCAAGTTAGATCTTTATGGTTGGA

CATGATAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAG
AAGTACCTGTAAAAATGTTCAACACCCTTAATCACCAGGGAAATGGAAAT
CAAAACAACACTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCA
AAAATTCAGGTGACAGCAGATACTGATGAGGATGTGGAGAAAGAGGAACA
CTCCTCCATTGTTGGTGGGATTGCTGGCTTGTACAACCACTCTGGAAATC
AGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAG
CAATACCATTCCTGGAAATATATCCTGAAGATGTCCCAACTGGTAAGAAG
GACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAG
CTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGT
GGTACATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTT
AGGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCGTCATCCTGAGTGA
TGTAACACATTCACAAAGGAACTCACACAATATGTATTCACTGATAAGTG
GATATTAGCCCAAAACCTAGGATACCCAAGATATAAGATACAATTTGCTA
AACACN

Query= MSMg01no094_d03.b1 MSMg01no094_d03.b1 CHROMAT_FILE:
MSMg01no094_d03.b1 PHD_FILE: MSMg01no094_d03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:49:44 2005
         (544 letters)



>mm_chr12_97685787_97686730
          Length = 944

 Score =  919 bits (475), Expect = 0.0
 Identities = 525/545 (96%), Gaps = 9/545 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctctgtca-tattttttatctcgcattatctaacaagctatgcatatacacagtt 63
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 gaattctctgtcaatattttttatctcgcattatctaacaagctatgcatatacacagtt 259

                                                                       
Query: 64  tatgaccaacaacggaaaactatttttcttcattattttcacttgctttgtcactgtatc 123
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tatgaccaacaaaggaaaactatttttcttcattattttcacttgctttgtcactgtatc 319

                                                                       
Query: 124 attagggggaaaatgtcttcttagcactgcctgagtcgggaattataaaaagtgtccatg 183
           ||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 320 attagtgggaaaatgccttcttagcactgcctgagtcaggaattataaaaagtgtccatg 379

                                                                       
Query: 184 taagaccatgcatttcatttcttcataaaggtatcaaactttacatcatttaggactggt 243
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 380 taagaccatgcatttcatttcttcataaaggtatcaaactttacatcatttaggcctggt 439

                                                                       
Query: 244 tatttttaatttgtgaaaatgaggtgttgcctttagtaagcatggtttttcttgacctag 303
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 catttttaatttgtgaaaatgaggtgttgcctttagtaagcatggtttttcttgacctag 499

                                                                       
Query: 304 aaatttgaagtggggataaatatctacctttaatgcattcttttgcaaaaatatcttcct 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aaatttgaagtggggataaatatctacctttaatgcattcttttgcaaaaatatcttcct 559

                                                                       
Query: 364 ttcgtatatctttatgaagtgtgcgt-t-----tgtgtgtgtgtgtgtgtgtgcacgtgt 417
           ||| |||||||||||| ||||||||| |     ||||||||||||||||||||   ||||
Sbjct: 560 ttcctatatctttatggagtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt--gtgt 617

                                                                       
Query: 418 gcacgtgcatgtgcatgtttgtgtttgagagggtaagagatatatgacaatacatttaca 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gcacgtgcatgtgcatgtttgtgtttgagagggtaagagatatatgacaatacatttaca 677

                                                                       
Query: 478 taggaatgtcaatttattacctacaaatagaatgtgtcatttcaccgggagctcatcact 537
            ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 aaggaatgtcaagttattacctacaaatagaatgtgtcatttcaccgggagctcatcact 737

                
Query: 538 ttcag 542
           |||||
Sbjct: 738 ttcag 742


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space:   498756
Effective search space used:   498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)