Query= MSMg01no095_b15.b1 MSMg01no095_b15.b1 CHROMAT_FILE:
MSMg01no095_b15.b1 PHD_FILE: MSMg01no095_b15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:01 2005
(296 letters)
>mm_chr12_31338003_31338698
Length = 696
Score = 503 bits (260), Expect = e-147
Identities = 287/296 (96%), Gaps = 2/296 (0%)
Strand = Plus / Minus
Query: 1 tattttgatacaagtactgtgtgagcatggttcatgtgaatatcgcatctcagactcgca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 495 tattttgatacaagtactgtgtgagcatggttcatgtgaatatcgcatctcagact-gca 437
Query: 61 ttctatacctatcaatgttgaaaatttttagcgtgtttattggtcacttaaatattttct 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 436 ttctatacctatcaatgttgaaaatttttagtgtgtttattggtcacttaaatattttct 377
Query: 121 -cttttgaagtatgtattcacatattttacctattttaattaaagtgcataattttatag 179
||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 376 ccttttgacgtatttattcacatattttacctattttaattaaagtgcatagttttatag 317
Query: 180 ttaaaactcagacattatttgcataatctgagtgaattctttgttagacatacatacaaa 239
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 316 ttaaaactcagacattatttgcatgatctgagtgaattctttgttagacatacatacaaa 257
Query: 240 tatctttctggtcttatttcccctactgacattcctaaaccttgttttaattgcta 295
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 256 tatcgttctggtcttattttccctactgacattcctaaaccttgttttaattgcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no095_b15.g1 MSMg01no095_b15.g1 CHROMAT_FILE:
MSMg01no095_b15.g1 PHD_FILE: MSMg01no095_b15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:01 2005
(287 letters)
>mm_chr12_31214701_31215387
Length = 687
Score = 547 bits (283), Expect = e-160
Identities = 286/287 (99%)
Strand = Plus / Plus
Query: 1 atcactctgcctgtcactatcagctcatcacttcacctctgtgatttgcaaggaactctc 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 atcactctgcctgtcactatcagctcatcacttcacctctgtgatttggaaggaactctc 260
Query: 61 tccattctttcgtaaaatggcaggtcttggtctgtacatacctctgtaaataattgctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccattctttcgtaaaatggcaggtcttggtctgtacatacctctgtaaataattgctgg 320
Query: 121 ctcatgagagctgatatctcctttcattattgcctccttgtccaccagaaggagctcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcatgagagctgatatctcctttcattattgcctccttgtccaccagaaggagctcatt 380
Query: 181 tagaaagaaacttcaataccaacatatctcagagtgtgtaatcctccttgacaaggaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagaaagaaacttcaataccaacatatctcagagtgtgtaatcctccttgacaaggaggt 440
Query: 241 aaggaagcaaggaaaccttggtccagggtccaagatgatcatttgat 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaggaagcaaggaaaccttggtccagggtccaagatgatcatttgat 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
