Query= MSMg01no095_p22.b1 MSMg01no095_p22.b1 CHROMAT_FILE:
MSMg01no095_p22.b1 PHD_FILE: MSMg01no095_p22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:11 2005
(574 letters)
>mm_chr12_51856439_51857412
Length = 974
Score = 1040 bits (538), Expect = 0.0
Identities = 562/570 (98%)
Strand = Plus / Plus
Query: 5 gaattcacctcaccatccatcctgacagaggaaaagctggtcagtccggtaatgtgattt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacctcaccatccatcctgacagaggaaaagctggtcagtccggtaatgtgattt 264
Query: 65 gttgagggaccttcgacctaagacttcagtctgagcagccatgactgccttaaagtttgc 124
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggtgagggaccttcgacctaagacttcagtctgagcagccatgactgccttaaagtttgc 324
Query: 125 taatagccaggtcttctcatttgcttcctgttgatgtgataaaacacttatcaaaaacaa 184
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taatagccaggtcttctcgtttgcttcctgttgatgtgataaaacacttatcaaaaacaa 384
Query: 185 ctttgagataaaatagtttgtttcagttgtatattccaagtcacactctgtcatatggcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctttgagataaaatagtttgtttcagttgtatattccaagtcacactctgtcatatggcc 444
Query: 245 aaggcaggaaccgaaggcaggaaatgaagctgagtgctacgtattggcttgatcctcatg 304
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaggcaggaaccgaaggcaggaactgaagctgagtgctacgtattggcttgatcctcatg 504
Query: 305 ctttttagactgctttcttgtgcatccagaaccctatgtccagggtaggagtgcccatat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctttttagactgctttcttgtgcatccagaaccctatgtccagggtaggagtgcccatat 564
Query: 365 acatcattaatcatgaacggagccaatctggtggggttgtcttctcagttgagattcctt 424
|||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 565 acatcattaatcatgaacggggccaatctgatggggttgtcttctcagttgagattcctt 624
Query: 425 ttgcccagatgggcctagtttatgatgggttcacaaacaaactaaccagcacaacaggtc 484
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tttcccagatgggcctagtttatgatgggttcacaaacaaactaaccagcacaacaggtc 684
Query: 485 accctaagccaggtcaaaggactcatttctaaggagctctcactctttgggaagctagac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 685 accctaagccaggtcaaaggactcatttctaaggagctctcactctttgggaagctatac 744
Query: 545 tccaagatatcagtctcatgcaagatggaa 574
|||| |||||||||||||||||||||||||
Sbjct: 745 tccatgatatcagtctcatgcaagatggaa 774
Score = 103 bits (53), Expect = 5e-26
Identities = 71/77 (92%)
Strand = Plus / Minus
Query: 153 tgttgatgtgataaaacacttatcaaaaacaactttgagataaaatagtttgtttcagtt 212
|||||| |||||||||| || | |||||||||| ||||||||||||| ||||||||||||
Sbjct: 77 tgttgacgtgataaaactctgaccaaaaacaacgttgagataaaataatttgtttcagtt 18
Query: 213 gtatattccaagtcaca 229
|||||||||||||||||
Sbjct: 17 gtatattccaagtcaca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space: 543696
Effective search space used: 543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_p22.g1 MSMg01no095_p22.g1 CHROMAT_FILE:
MSMg01no095_p22.g1 PHD_FILE: MSMg01no095_p22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:11 2005
(290 letters)
>mm_chr12_51942604_51943293
Length = 690
Score = 549 bits (284), Expect = e-161
Identities = 287/288 (99%), Gaps = 1/288 (0%)
Strand = Plus / Minus
Query: 1 ataacaagtga-tttttttctagaggattttttaaaataataaaatttccttatactaat 59
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ataacaagtgattttttttctagaggattttttaaaataataaaatttccttatactaat 476
Query: 60 ttggggcagtatttattacatgcctttttatacctgattctctttggatgtcatataggt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ttggggcagtatttattacatgcctttttatacctgattctctttggatgtcatataggt 416
Query: 120 caaagcaaatagatatattttgattgttctacttctgtaatttgaatttttaaggaaata 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 caaagcaaatagatatattttgattgttctacttctgtaatttgaatttttaaggaaata 356
Query: 180 gagctggtaaaatgacattgggtataactaaggaaacagcatgaacacacagagcggagg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gagctggtaaaatgacattgggtataactaaggaaacagcatgaacacacagagcggagg 296
Query: 240 gctgcaaagaaggcagtccttcaaagcaatttttttgaagatgacttc 287
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gctgcaaagaaggcagtccttcaaagcaatttttttgaagatgacttc 248
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
