XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCGCGGAATTCCATTT
CAATTTCAAAATTCAGTTTTCAAGTAAATTCCTGTGCAAGTACATTGTTA
TGAATGCTAACTTGTGAAGTGTGTGTCATGTGTCTTAATTCAGTGATTTA
ATCTCCCATAAAACACAGCAGAGAAGATATACACTCATTAGTATAATGAT
TTGCATATTTAAAAAAAAATGAATATCTTCATGATAAGCTAAATAAATGT
TTTTTTTTAACTTATACTTTTAAAGCTATTATAATCAGGAAAACATAATA
ATTAAAAGCAAATAAATTCTATAATGCAGTACTTATACAATTAGAGTTTG
ATCAAATTATGTAAAAACTTGACATCTTTTACTGTTATTCCTATGCCATT
TAAAGGGATACTAACACATGTACATTCATGATTCCCCACTAACAGCTTGT
ATATGTTCCCCTGAGACACTGACTAATTTGGAGGTCCCCAATGAGCTATC
CCTATTAAGCTCTAAGGTATCCATAAAACTATATTTAACAAAGCATAGTG
ACTAAGAATTTTACTTTTACAAGAGACCATATGGTATAGTGTCCTTACGG
GAGCTATATTGTACCAAATTTATTAATAATTAACAATATTATTGCATAGT
GAATATGCAACTCCAAATAAAGAAGTCCAATTAGCTAAATGACAAATTAT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCTTAAAGAAAGCCAAGGGTATGCAAACAGTTGAAGGAAACAAATAA
ACAAAAACAACAAAAGCAACAACAGAAAAATCTGTGTTCTAGACATGAAA
ATGGAAACAATAGCAATAAAGAAAATAAAACAATGGGAATTCTGGAAATT
TAGGAATGGGAACATGACCTATAGGCAGATTTCAGAGGCACAATAAAAGA
GATGGAAAAAAGAATCTCAGGTACTGAAGATATGACAAAAGAAGTGGATG
ATACTCCAGTCAAAGAAAATACTAAGTGTATAAAAATTTTGACACAAAGC
AACCAGAAAATCTGTAACAGCGTGAAAAGACCAAACCTAAGAATAATAGG
AATAGTAAAAGGAGAAGAATTTCAGGTCAGAGGTCCAGAAAGTATTTTCG
TTTTTTTTTTCCATTTTTTATTAGGCATTTAGCTCATTTACATTTCCAAT
GCTATACCAAAATCCCCCATACCCACCCACCCCCACTCCCCTACCTAAAC
ACTCCCCACTTTTGGCCCTGGCATTCCCCTGTACTGGGGCATATAAAGTT
TGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTT
TTGATACATATGCAGCTAGAGCCAAGAGCTCCAGGGTACTGGTC

Query= MSMg01no097_j04.b1 MSMg01no097_j04.b1 CHROMAT_FILE:
MSMg01no097_j04.b1 PHD_FILE: MSMg01no097_j04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:22 2005
         (620 letters)



>mm_chr12_62222276_62223295
          Length = 1020

 Score = 1056 bits (546), Expect = 0.0
 Identities = 600/618 (97%), Gaps = 2/618 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   attcagttttcaagtaaattcctgtgcaagtacattgttatgaatgctaacttgtgaagt 60
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 attcagttttcaagtaaattcctgtgcaagtacattgttatgaacgctaacttgtgaagt 260

                                                                       
Query: 61  gtgtgtcatgtgtcttaattcagtgatttaatctcccataaaacacagcagagaagatat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgtgtcatgtgtcttaattcagtgatttaatctcccataaaacacagcagagaagatat 320

                                                                       
Query: 121 acactcattagtataatgatttgcatatttaaaaaaaaatgaatatcttcatgataagct 180
           ||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||
Sbjct: 321 acactcattagtataatgatttgcatattt-gaaaaacatgaatatcttcatgataagct 379

                                                                       
Query: 181 aaataaatgtttttttttaacttatacttttaaagctattataatcaggaaaacataata 240
           ||||| |||||| |||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 380 aaatacatgtttattttcaacttatacttttaaagctattataatcgggaaaacataata 439

                                                                       
Query: 241 attaaaagcaaataaattctataatgcagtacttatacaattagagtttgatcaaattat 300
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 440 attaaaagcaaataaattctataatgcagtacttatacaattatagtttgatcaaattat 499

                                                                       
Query: 301 gtaaaaacttgacatcttttactgttattcctatgccatttaaagggatactaacacatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtaaaaacttgacatcttttactgttattcctatgccatttaaagggatactaacacatg 559

                                                                       
Query: 361 tacattcatgattccccactaacagcttgtatatgttcccctgagacactgactaatttg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tacattcatgattccccactaacagcttgtatatgttcccctgagacactgactaatttg 619

                                                                       
Query: 421 gaggtccccaatgagctatccctattaagctctaaggtatccataaaa-ctatatttaac 479
           |||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||| 
Sbjct: 620 gaggtccccaatgagctatccctaataagctctagggtatccataaaaactatatttaaa 679

                                                                       
Query: 480 aaagcatagtgactaagaattttacttttacaagagaccatatggtatagtgtccttacg 539
           |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 680 aaagcatagtgactaagaattttacttttataagagaccatatggtatagtgtccttaag 739

                                                                       
Query: 540 ggagctatattgtaccaaatttattaataattaacaatattattgcatagtgaatatgca 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 740 ggagctatattgtaccaaatttattaataattaacaatattattgcatagtgaatattca 799

                             
Query: 600 actccaaataaagaagtc 617
           | || |||||||||||||
Sbjct: 800 attcaaaataaagaagtc 817


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space:   616100
Effective search space used:   616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)